The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478342

Identifier: 113478342

GI number: 113478342

Start: 7669368

End: 7671188

Strand: Reverse

Name: 113478342

Synonym: Tery_5018

Alternate gene names: NA

Gene position: 7671188-7669368 (Counterclockwise)

Preceding gene: 113478343

Following gene: 113478341

Centisome position: 98.98

GC content: 40.09

Gene sequence:

>1821_bases
ATGACTACTCCAGTAGAGTTTACTTTTTCCGACTTGATCGCCGGGTATGTTACAAACTTCGACTCAGGCACAGATATTTT
TGGGCTCAAAACAACAGATGGCAGAGAATTTAAAGCCAAGTTAACTCCTACTAGTTATGCTAAGCTAGTACAAAACTTAG
ACGAAGCATACCCAGATGCTACAGGTGCTATGCGATCGATGCTGGTGCCTGGTAGGTATGTATTCACTTATGGCGTTTTT
TACCCAGATAGTTCCATATTTGAAGCTAAACAAATAGTATTTGTCGGTCGTCAAGCAGATGACTATATATTTGAAAAATC
AAACTGGTGGGTACACCAGGTTCGCTCCCTAGCTAATTTTTATGTCAAAGCTCAATTTGCTGGTGAAGAAATAGACTACC
GCAACTATCGCACAACTTTAAGTCTTTCTGGTGTAAGGTCTCAGGTGAATTTCCGACAAGAAACAGATACTATCTCCCGG
ATGGTTTATGGGATGGCTACAGCATATATGATGACTGGGGAAGAAATTTTCCTAGAAGCAGCTGAGAAAGGTACTGAATA
TCTGAGAGACCACATGAGATTTGTGGACTTAGATGAAGGTATAGTTTATTGGTATCACGGTATCGATGTGCAAGGGGAAC
GAGAGCAGAAAATTTTCGCTTCAGAATTTGGTGATGACTATGATGCTATTCCCGCTTACGAACAAATTTATGCCTTGGCA
GGTCCATTACAAACTTATCGCATTAATGGCGACCCTAGGATAATGGACGATACCGAGAAAACTATTAAGTTATTCAACGA
CTTTTTTCTAGATAAAACTGATCGCGGTGGTTATTACTCCCACCTAGATCCTATTACTCTAGATCCTCTGAGCGAGTCAT
TAGGTCGGAACAAAGGTACTAAAAACTGGAACTCAGTTGGTGACCATGCACCAGCATATCTAATTAATCTCTGGTTAGCG
ACAGAAAAACCTGAATATGCAGATATGCTCGAATACACTTTCGATACTATTGAAAAGCGTTTTCCAGATTACGAAAACTG
CCCCTTTGTCAATGAAAAATTCTTTGAAGACTGGAGTGCAGATCATACTTGGGGATGGCAGCAAAACCGGGCAGTAATTG
GTCACAATATGAAAATTGCTTGGAATTTGATGCGGATGAATAGCCTCAAACCTAAGGATACTTATGTTGAACTGGCAAAG
AAAATTGCTGAGGTGATGCCAGCAGTAGGGAGTGATCAACAACGAGGTGGTTGGTATGACGTGGTGGAAAGAGCATTAGG
AGAAGATGAAAAAAATCATCGTTTTGTTTGGCATGATCGCAAAGCTTGGTGGCAGCAAGAACAGTCTATTCTGGCTTATT
ATATTCTTGCAGGAACTCTTAAAGATCAAGAATATCATCGTTTAGGGCGGGAAGCTGCAGCTTTTTACAACGCCTGGTTT
CTGGATACAGAAGATGGTGGGGTTTATTTCAATGTTCTTGCTAATGGTATCCCTTTCTTGGCAAGTGGTAATGAACGAGG
TAAAGGTTCCCACTCTATGAGCGGTTATCACTCTACAGAATTATGCTATCTAGCTGCAGTTTATACTAATCTATTGGTTA
CTAAGCAGCCAATGGATTTTTATTTTAAGCCTATTCCTAGTGGTTTCCCTGATAATATTTTACGAGTATCACCAGATATT
CTGCCTCCTGGTAGCATTAAAATTGGTTCTGTAGAAATTGATGGTAAACCTTACAGTGATTTTGATGCGGATAAACTTTT
TGTGAAGTTGCCTGATACTAAGGAACGGGTGAAAGTTAAGGTCAATATTGTACCTAATTAA

Upstream 100 bases:

>100_bases
TAAACCCGGTTTTTTTTGTTTGGGTTGGTTAGTCCTGATAATAACCTTTTAGCTGAGACAAAAAACATTAAAAAAACTTG
TAATTAAAGATAATTAAAAA

Downstream 100 bases:

>100_bases
TTAGACAAGAAACACTATGGGTGAAACCTAACCCCCCTGGCCGTCGCCTTGAAGGAGATGGCCATGGGGAGAGGTATTAA
AGTCCAGTAGAGTGGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Anti-Sigma-Factor Antagonist; N-Acylglucosamine 2-Epimerase

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MTTPVEFTFSDLIAGYVTNFDSGTDIFGLKTTDGREFKAKLTPTSYAKLVQNLDEAYPDATGAMRSMLVPGRYVFTYGVF
YPDSSIFEAKQIVFVGRQADDYIFEKSNWWVHQVRSLANFYVKAQFAGEEIDYRNYRTTLSLSGVRSQVNFRQETDTISR
MVYGMATAYMMTGEEIFLEAAEKGTEYLRDHMRFVDLDEGIVYWYHGIDVQGEREQKIFASEFGDDYDAIPAYEQIYALA
GPLQTYRINGDPRIMDDTEKTIKLFNDFFLDKTDRGGYYSHLDPITLDPLSESLGRNKGTKNWNSVGDHAPAYLINLWLA
TEKPEYADMLEYTFDTIEKRFPDYENCPFVNEKFFEDWSADHTWGWQQNRAVIGHNMKIAWNLMRMNSLKPKDTYVELAK
KIAEVMPAVGSDQQRGGWYDVVERALGEDEKNHRFVWHDRKAWWQQEQSILAYYILAGTLKDQEYHRLGREAAAFYNAWF
LDTEDGGVYFNVLANGIPFLASGNERGKGSHSMSGYHSTELCYLAAVYTNLLVTKQPMDFYFKPIPSGFPDNILRVSPDI
LPPGSIKIGSVEIDGKPYSDFDADKLFVKLPDTKERVKVKVNIVPN

Sequences:

>Translated_606_residues
MTTPVEFTFSDLIAGYVTNFDSGTDIFGLKTTDGREFKAKLTPTSYAKLVQNLDEAYPDATGAMRSMLVPGRYVFTYGVF
YPDSSIFEAKQIVFVGRQADDYIFEKSNWWVHQVRSLANFYVKAQFAGEEIDYRNYRTTLSLSGVRSQVNFRQETDTISR
MVYGMATAYMMTGEEIFLEAAEKGTEYLRDHMRFVDLDEGIVYWYHGIDVQGEREQKIFASEFGDDYDAIPAYEQIYALA
GPLQTYRINGDPRIMDDTEKTIKLFNDFFLDKTDRGGYYSHLDPITLDPLSESLGRNKGTKNWNSVGDHAPAYLINLWLA
TEKPEYADMLEYTFDTIEKRFPDYENCPFVNEKFFEDWSADHTWGWQQNRAVIGHNMKIAWNLMRMNSLKPKDTYVELAK
KIAEVMPAVGSDQQRGGWYDVVERALGEDEKNHRFVWHDRKAWWQQEQSILAYYILAGTLKDQEYHRLGREAAAFYNAWF
LDTEDGGVYFNVLANGIPFLASGNERGKGSHSMSGYHSTELCYLAAVYTNLLVTKQPMDFYFKPIPSGFPDNILRVSPDI
LPPGSIKIGSVEIDGKPYSDFDADKLFVKLPDTKERVKVKVNIVPN
>Mature_605_residues
TTPVEFTFSDLIAGYVTNFDSGTDIFGLKTTDGREFKAKLTPTSYAKLVQNLDEAYPDATGAMRSMLVPGRYVFTYGVFY
PDSSIFEAKQIVFVGRQADDYIFEKSNWWVHQVRSLANFYVKAQFAGEEIDYRNYRTTLSLSGVRSQVNFRQETDTISRM
VYGMATAYMMTGEEIFLEAAEKGTEYLRDHMRFVDLDEGIVYWYHGIDVQGEREQKIFASEFGDDYDAIPAYEQIYALAG
PLQTYRINGDPRIMDDTEKTIKLFNDFFLDKTDRGGYYSHLDPITLDPLSESLGRNKGTKNWNSVGDHAPAYLINLWLAT
EKPEYADMLEYTFDTIEKRFPDYENCPFVNEKFFEDWSADHTWGWQQNRAVIGHNMKIAWNLMRMNSLKPKDTYVELAKK
IAEVMPAVGSDQQRGGWYDVVERALGEDEKNHRFVWHDRKAWWQQEQSILAYYILAGTLKDQEYHRLGREAAAFYNAWFL
DTEDGGVYFNVLANGIPFLASGNERGKGSHSMSGYHSTELCYLAAVYTNLLVTKQPMDFYFKPIPSGFPDNILRVSPDIL
PPGSIKIGSVEIDGKPYSDFDADKLFVKLPDTKERVKVKVNIVPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69638; Mature: 69507

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPVEFTFSDLIAGYVTNFDSGTDIFGLKTTDGREFKAKLTPTSYAKLVQNLDEAYPDA
CCCCCEEHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCH
TGAMRSMLVPGRYVFTYGVFYPDSSIFEAKQIVFVGRQADDYIFEKSNWWVHQVRSLANF
HHHHHHHCCCCEEEEEEEEECCCCCHHCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHH
YVKAQFAGEEIDYRNYRTTLSLSGVRSQVNFRQETDTISRMVYGMATAYMMTGEEIFLEA
EEEEEECCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHH
AEKGTEYLRDHMRFVDLDEGIVYWYHGIDVQGEREQKIFASEFGDDYDAIPAYEQIYALA
HHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
GPLQTYRINGDPRIMDDTEKTIKLFNDFFLDKTDRGGYYSHLDPITLDPLSESLGRNKGT
CCCEEEEECCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHCCCCCC
KNWNSVGDHAPAYLINLWLATEKPEYADMLEYTFDTIEKRFPDYENCPFVNEKFFEDWSA
CCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
DHTWGWQQNRAVIGHNMKIAWNLMRMNSLKPKDTYVELAKKIAEVMPAVGSDQQRGGWYD
CCCCCCCCCCEEECCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VVERALGEDEKNHRFVWHDRKAWWQQEQSILAYYILAGTLKDQEYHRLGREAAAFYNAWF
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHEEEE
LDTEDGGVYFNVLANGIPFLASGNERGKGSHSMSGYHSTELCYLAAVYTNLLVTKQPMDF
EECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCC
YFKPIPSGFPDNILRVSPDILPPGSIKIGSVEIDGKPYSDFDADKLFVKLPDTKERVKVK
EEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEE
VNIVPN
EEECCC
>Mature Secondary Structure 
TTPVEFTFSDLIAGYVTNFDSGTDIFGLKTTDGREFKAKLTPTSYAKLVQNLDEAYPDA
CCCCEEHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHCCCH
TGAMRSMLVPGRYVFTYGVFYPDSSIFEAKQIVFVGRQADDYIFEKSNWWVHQVRSLANF
HHHHHHHCCCCEEEEEEEEECCCCCHHCCEEEEEEECCCCCEEEECCCHHHHHHHHHHHH
YVKAQFAGEEIDYRNYRTTLSLSGVRSQVNFRQETDTISRMVYGMATAYMMTGEEIFLEA
EEEEEECCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHH
AEKGTEYLRDHMRFVDLDEGIVYWYHGIDVQGEREQKIFASEFGDDYDAIPAYEQIYALA
HHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
GPLQTYRINGDPRIMDDTEKTIKLFNDFFLDKTDRGGYYSHLDPITLDPLSESLGRNKGT
CCCEEEEECCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHCCCCCC
KNWNSVGDHAPAYLINLWLATEKPEYADMLEYTFDTIEKRFPDYENCPFVNEKFFEDWSA
CCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
DHTWGWQQNRAVIGHNMKIAWNLMRMNSLKPKDTYVELAKKIAEVMPAVGSDQQRGGWYD
CCCCCCCCCCEEECCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
VVERALGEDEKNHRFVWHDRKAWWQQEQSILAYYILAGTLKDQEYHRLGREAAAFYNAWF
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHEEEE
LDTEDGGVYFNVLANGIPFLASGNERGKGSHSMSGYHSTELCYLAAVYTNLLVTKQPMDF
EECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCC
YFKPIPSGFPDNILRVSPDILPPGSIKIGSVEIDGKPYSDFDADKLFVKLPDTKERVKVK
EEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEE
VNIVPN
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA