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The map label for this gene is yhbO [C]

Identifier: 113478343

GI number: 113478343

Start: 7671984

End: 7672586

Strand: Reverse

Name: yhbO [C]

Synonym: Tery_5019

Alternate gene names: 113478343

Gene position: 7672586-7671984 (Counterclockwise)

Preceding gene: 113478344

Following gene: 113478342

Centisome position: 99.0

GC content: 34.99

Gene sequence:

>603_bases
ATGGTGGCAGCAACAAAAGGCAAAATTGGAGTTTTAATTGAAGACCACTTTGATTCTACAGAATACCGTAAATTTAATGA
ATTTTTTCCTGAAAAAGGCTATGAAGTAGAATATATTACTCATTTATGGGGGCAAAAAGAATTACACTTTGCTTCTAACC
CAGAGAACAATGTTATTGAAGAAAAAGTGACAGTTAGCACAGAAGTTAACGATATTAAGCCTTCAGACTATAAAGGTATT
ATATGTATTGGTGCTTATGCTATGGATCGGTTGCGTTATCAGGTAAACCCTAAAAAAGGCGAAAAAAACCAAGCACCAGC
AGTAGCATTTTTGCGCAATGCAGTCAATACAGAAAATGTAAAGTTAGGAGCAATTTGTCATAGTTTATGGCTGTTTTGTG
CTGACAATGAAATGCTTAAAGATAAAAAAGTAACTTGCGCTCATAATATCATTTGTGACGTAGAAAATGCTGGAGCTAAT
GTAATATTTGATGGGGAACAAACGGCAGAATTAGTTATTGATGGTAACTTAATCACAGCAAAGCACCCTGGTGTAACCGA
TGAATTTATGGAAAAATTTATCGAAGCGATCGAAGCTAGCTAA

Upstream 100 bases:

>100_bases
AACGATTTATCCATCCTAGAAAACCGGTTTATTTACATAAGTCCTAATAACGTTAAACTATTCTTTCATTAGACTACAGA
AAAAAATCAGGAGAAAAAAA

Downstream 100 bases:

>100_bases
ATATTAAGGTAGTTCTTTTGAATCATCTGATGAAAATTATAATGTGCCAAGAATAACGACATGAAGTAAAAAAAATTGGA
CATAATGATTGGATTTAGAT

Product: ThiJ/PfpI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MVAATKGKIGVLIEDHFDSTEYRKFNEFFPEKGYEVEYITHLWGQKELHFASNPENNVIEEKVTVSTEVNDIKPSDYKGI
ICIGAYAMDRLRYQVNPKKGEKNQAPAVAFLRNAVNTENVKLGAICHSLWLFCADNEMLKDKKVTCAHNIICDVENAGAN
VIFDGEQTAELVIDGNLITAKHPGVTDEFMEKFIEAIEAS

Sequences:

>Translated_200_residues
MVAATKGKIGVLIEDHFDSTEYRKFNEFFPEKGYEVEYITHLWGQKELHFASNPENNVIEEKVTVSTEVNDIKPSDYKGI
ICIGAYAMDRLRYQVNPKKGEKNQAPAVAFLRNAVNTENVKLGAICHSLWLFCADNEMLKDKKVTCAHNIICDVENAGAN
VIFDGEQTAELVIDGNLITAKHPGVTDEFMEKFIEAIEAS
>Mature_200_residues
MVAATKGKIGVLIEDHFDSTEYRKFNEFFPEKGYEVEYITHLWGQKELHFASNPENNVIEEKVTVSTEVNDIKPSDYKGI
ICIGAYAMDRLRYQVNPKKGEKNQAPAVAFLRNAVNTENVKLGAICHSLWLFCADNEMLKDKKVTCAHNIICDVENAGAN
VIFDGEQTAELVIDGNLITAKHPGVTDEFMEKFIEAIEAS

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22432; Mature: 22432

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAATKGKIGVLIEDHFDSTEYRKFNEFFPEKGYEVEYITHLWGQKELHFASNPENNVIE
CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEHHCCCCEEEECCCCCCCCCC
EKVTVSTEVNDIKPSDYKGIICIGAYAMDRLRYQVNPKKGEKNQAPAVAFLRNAVNTENV
CEEEEEEECCCCCCCCCCCEEEEEHHHHHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCE
KLGAICHSLWLFCADNEMLKDKKVTCAHNIICDVENAGANVIFDGEQTAELVIDGNLITA
EHHHHHHHHHEEECCCCHHCCCCCEEECEEEEEECCCCCEEEECCCCCEEEEEECCEEEE
KHPGVTDEFMEKFIEAIEAS
CCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAATKGKIGVLIEDHFDSTEYRKFNEFFPEKGYEVEYITHLWGQKELHFASNPENNVIE
CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEHHCCCCEEEECCCCCCCCCC
EKVTVSTEVNDIKPSDYKGIICIGAYAMDRLRYQVNPKKGEKNQAPAVAFLRNAVNTENV
CEEEEEEECCCCCCCCCCCEEEEEHHHHHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCE
KLGAICHSLWLFCADNEMLKDKKVTCAHNIICDVENAGANVIFDGEQTAELVIDGNLITA
EHHHHHHHHHEEECCCCHHCCCCCEEECEEEEEECCCCCEEEECCCCCEEEEEECCEEEE
KHPGVTDEFMEKFIEAIEAS
CCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA