Click here to switch to the map view.

The map label for this gene is 113478219

Identifier: 113478219

GI number: 113478219

Start: 7462209

End: 7462706

Strand: Reverse

Name: 113478219

Synonym: Tery_4877

Alternate gene names: NA

Gene position: 7462706-7462209 (Counterclockwise)

Preceding gene: 113478221

Following gene: 113478218

Centisome position: 96.29

GC content: 35.34

Gene sequence:

>498_bases
ATGATAACTCAAGTATTAAACCAATCTGTGGTAATATTTTCTCAGAATTACTTACCAATCACCCGCATAAATATCAAGCG
GGCGATCGCTATGTGGGTGTCTAGTATAGCTGAATCTCTAGATTTTAATAATGGAAGTTGCTGGCCTTTACGTTCTACTA
GTTTGGTCTTATATATGTCTCAACAAATTACCCTGAGGATGATTTCCCAAAAAAGGTTATGGAAAGTTCCTCCAATGAAG
CAAAAAGAAGTGTTAAAGCGAGATCATCATTGTTGTCAATATTGTGGTAGTACTAAACGTTTAATTTTGGATAATCTAAT
TCGTAGCTCAAAAGACCGTAAACATATTTGGGAGTATGTAGTTACAGCTTGCGAGAAATGCAATGTTTTTAAAGGTAGTC
ATACTCTAATTGAAGCAGAGATGAAGTTATTACATCAACCGAAAATACCAATACATCTGATTATTGCATTTGCTAAACAG
TTCTGGCGCGAACGGTAA

Upstream 100 bases:

>100_bases
CAAAAAAAAATAAAGTGAACTTTTAAATTTAGATAATCAACTTAGAAACCAGTTGCTATAAAAAATCTAAGATTTTAAAT
TAGGAGGTAAAGCAGTGACG

Downstream 100 bases:

>100_bases
CACAAGCTTTAGAAAGTTCTATTTTTTTGCTGGATTTGACCTGAAAAGTTGCTCATAAGTTTCGTTAATTCTAGTGAAGT
AACTAGAACTACATTTTGAT

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; HNH Endonuclease Domain-Containing Protein; HNH Nuclease; HNH Endonuclease Domain Protein; Restriction Endonuclease; McrA/HNH Family Nuclease; Hnh Endonuclease; Endonuclease

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MITQVLNQSVVIFSQNYLPITRINIKRAIAMWVSSIAESLDFNNGSCWPLRSTSLVLYMSQQITLRMISQKRLWKVPPMK
QKEVLKRDHHCCQYCGSTKRLILDNLIRSSKDRKHIWEYVVTACEKCNVFKGSHTLIEAEMKLLHQPKIPIHLIIAFAKQ
FWRER

Sequences:

>Translated_165_residues
MITQVLNQSVVIFSQNYLPITRINIKRAIAMWVSSIAESLDFNNGSCWPLRSTSLVLYMSQQITLRMISQKRLWKVPPMK
QKEVLKRDHHCCQYCGSTKRLILDNLIRSSKDRKHIWEYVVTACEKCNVFKGSHTLIEAEMKLLHQPKIPIHLIIAFAKQ
FWRER
>Mature_165_residues
MITQVLNQSVVIFSQNYLPITRINIKRAIAMWVSSIAESLDFNNGSCWPLRSTSLVLYMSQQITLRMISQKRLWKVPPMK
QKEVLKRDHHCCQYCGSTKRLILDNLIRSSKDRKHIWEYVVTACEKCNVFKGSHTLIEAEMKLLHQPKIPIHLIIAFAKQ
FWRER

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19427; Mature: 19427

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITQVLNQSVVIFSQNYLPITRINIKRAIAMWVSSIAESLDFNNGSCWPLRSTSLVLYMS
CCHHHHCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEH
QQITLRMISQKRLWKVPPMKQKEVLKRDHHCCQYCGSTKRLILDNLIRSSKDRKHIWEYV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
VTACEKCNVFKGSHTLIEAEMKLLHQPKIPIHLIIAFAKQFWRER
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITQVLNQSVVIFSQNYLPITRINIKRAIAMWVSSIAESLDFNNGSCWPLRSTSLVLYMS
CCHHHHCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCEEEEEEH
QQITLRMISQKRLWKVPPMKQKEVLKRDHHCCQYCGSTKRLILDNLIRSSKDRKHIWEYV
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
VTACEKCNVFKGSHTLIEAEMKLLHQPKIPIHLIIAFAKQFWRER
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA