| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478203
Identifier: 113478203
GI number: 113478203
Start: 7445429
End: 7445674
Strand: Reverse
Name: 113478203
Synonym: Tery_4854
Alternate gene names: NA
Gene position: 7445674-7445429 (Counterclockwise)
Preceding gene: 113478213
Following gene: 113478202
Centisome position: 96.07
GC content: 44.72
Gene sequence:
>246_bases ATGCCGTGTGTTTTAATCATTGGCTTGAGCATCATTCCCATTCCAGAACTCAACTCCCATTCCCTGTTGATTATGGATAA CGCTCCCTTTCATCAGAAGAAAGAAATCCGGGCGCTCGCAGCCCTTGATGGGCACAGTGTTTTTTTCTTAGCGCCCTACT CACCGGACTTCAACAAGATTGAAGAAGATTTAGCCATTCTCAAAAAGCAACGGAATATATGCTCCACCAGAAACAACACT GGATGA
Upstream 100 bases:
>100_bases TATGGGGAGCAAGATGGCAAAACCCGCAAGGGTAACAGCTTGATTGTCGGCAAGAGAGGTTCAAAACTTTTAGCTCCAGT ATTATTGACAGGGACGACCA
Downstream 100 bases:
>100_bases CATTGTTAGACTGTACGGAACTTAATTGTAATGACTATAACTATAAATCAGATCATCTATTAGCCAAAAATGTTCAATTT TTGGATGAAAATATATAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MPCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKIEEDLAILKKQRNICSTRNNT G
Sequences:
>Translated_81_residues MPCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKIEEDLAILKKQRNICSTRNNT G >Mature_80_residues PCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKIEEDLAILKKQRNICSTRNNTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9044; Mature: 8912
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKI CCEEEEECCEEECCCCCCCCEEEEEECCCCCCHHHHHEEEECCCCEEEEEECCCCCHHHH EEDLAILKKQRNICSTRNNTG HHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PCVLIIGLSIIPIPELNSHSLLIMDNAPFHQKKEIRALAALDGHSVFFLAPYSPDFNKI CEEEEECCEEECCCCCCCCEEEEEECCCCCCHHHHHEEEECCCCEEEEEECCCCCHHHH EEDLAILKKQRNICSTRNNTG HHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA