The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478172

Identifier: 113478172

GI number: 113478172

Start: 7401163

End: 7402356

Strand: Reverse

Name: 113478172

Synonym: Tery_4813

Alternate gene names: NA

Gene position: 7402356-7401163 (Counterclockwise)

Preceding gene: 113478173

Following gene: 113478169

Centisome position: 95.51

GC content: 30.9

Gene sequence:

>1194_bases
ATGAATCAACCACAACTAACTATCAGCAATAATAATGAAAATTTATGTACAATTATCTATAAAAGCATATCTGAATCTCA
AAATAAACGGATTACTTTTGCTGAATATATGGATTTAGTTTTATACCATCCCCAATATGGTTATTATGCAACTCATCCTG
TAAATATTGGCAAACAAGGAGACTTTTTAACCTCTCCTCATTGGGGTAGTGACTTTGGAGAATTATTAGCAGAACAATTT
CTACAAATGTGGCATATTTTGCAAAGGCCTAATAATTTTACTATAGTAGAAATGGGTGCTGGTCAGGGAATTTTAGCAGA
GCAAATTTTAGGTTATCTTAAACAAAAACATTTAGATTTTTTCCAAACAGTTGAATATCTAATTGTTGAAAAATCAGAAG
TTTTAAAAGTACAACAAAAACAAATTTTACAGTCATATCAAGTGAGATGGAGTGACTGGGATAAAATTTCCCATAGTTCA
ATTACAGGTTGTTTCTTTTCTAATGAGTTGGTAGATGCTTTTCCAGTGCATAAGTTTAGAATAGAAGAACGGGAAATTAA
AGAAATTTATGTGTCTTCTAACTCTCAAGGAAAGTTTGTAGAAATAACTGATAAAATTTCAACTCCTGAAATTGCTGAAT
ATTTTAATTTAGTGGATATAGATTTACTCTCATTTGTTGATGTTGAGGGTTATCAAAGTGAAGTAAATTTACAGGCTTTA
GATTGGATAAAAATTGTTAGTAATAAGTTGCTAAAGGGTTATTTATTAACTATTGATTATGGTTATCAAGCAGTACGCTA
TTATAATCCTGTTAGAAAAGAGGGAACTCTACAATGTTATTATCAACATCATCGAAATAATGACCCTTATTGGAATGTTG
GGCGACAAGATATTACTGCTCATGTTGATTTTACTGCTTTGGAAAAACAGGGAAATTTATTAGACTTAGAAACTCTAGGT
TTTACTAAACAAGGTTTATTTTTAATGGCTTTAGGTTTAGGAGATAGATTAAATGAATTATCAAATAATCAAGGTTTTTC
TGTTGAAGAAGTTTTCCGACGTAGGGAAGCATTACATTCATTAATAGACCCAATTGGGTTAGGAAATTTTGGGGTTTTGG
TGCAGAGCAAAAGTTTGAGTGAGGAAGAAAAAAAGCAAACTTTGAAAGGTTTAAGCATGCCTCCTATGGGTTAA

Upstream 100 bases:

>100_bases
ATAAATTTCAGATACAGTTAGATAATAAAACTAACTATTCCTATTTATAGGAAAGAAAAAAAAATTAATTTTTATTCTTT
CTTAATTTTTCCTTAAATTT

Downstream 100 bases:

>100_bases
TAATTTTAGAATTCATAAGTTGTTTTTGCAATGGGGGTTTTAAGCAGAAAAAGAGGGGGAAAATCCAGGGCAAACGCATC
TAATTTTTTTGACAAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNQPQLTISNNNENLCTIIYKSISESQNKRITFAEYMDLVLYHPQYGYYATHPVNIGKQGDFLTSPHWGSDFGELLAEQF
LQMWHILQRPNNFTIVEMGAGQGILAEQILGYLKQKHLDFFQTVEYLIVEKSEVLKVQQKQILQSYQVRWSDWDKISHSS
ITGCFFSNELVDAFPVHKFRIEEREIKEIYVSSNSQGKFVEITDKISTPEIAEYFNLVDIDLLSFVDVEGYQSEVNLQAL
DWIKIVSNKLLKGYLLTIDYGYQAVRYYNPVRKEGTLQCYYQHHRNNDPYWNVGRQDITAHVDFTALEKQGNLLDLETLG
FTKQGLFLMALGLGDRLNELSNNQGFSVEEVFRRREALHSLIDPIGLGNFGVLVQSKSLSEEEKKQTLKGLSMPPMG

Sequences:

>Translated_397_residues
MNQPQLTISNNNENLCTIIYKSISESQNKRITFAEYMDLVLYHPQYGYYATHPVNIGKQGDFLTSPHWGSDFGELLAEQF
LQMWHILQRPNNFTIVEMGAGQGILAEQILGYLKQKHLDFFQTVEYLIVEKSEVLKVQQKQILQSYQVRWSDWDKISHSS
ITGCFFSNELVDAFPVHKFRIEEREIKEIYVSSNSQGKFVEITDKISTPEIAEYFNLVDIDLLSFVDVEGYQSEVNLQAL
DWIKIVSNKLLKGYLLTIDYGYQAVRYYNPVRKEGTLQCYYQHHRNNDPYWNVGRQDITAHVDFTALEKQGNLLDLETLG
FTKQGLFLMALGLGDRLNELSNNQGFSVEEVFRRREALHSLIDPIGLGNFGVLVQSKSLSEEEKKQTLKGLSMPPMG
>Mature_397_residues
MNQPQLTISNNNENLCTIIYKSISESQNKRITFAEYMDLVLYHPQYGYYATHPVNIGKQGDFLTSPHWGSDFGELLAEQF
LQMWHILQRPNNFTIVEMGAGQGILAEQILGYLKQKHLDFFQTVEYLIVEKSEVLKVQQKQILQSYQVRWSDWDKISHSS
ITGCFFSNELVDAFPVHKFRIEEREIKEIYVSSNSQGKFVEITDKISTPEIAEYFNLVDIDLLSFVDVEGYQSEVNLQAL
DWIKIVSNKLLKGYLLTIDYGYQAVRYYNPVRKEGTLQCYYQHHRNNDPYWNVGRQDITAHVDFTALEKQGNLLDLETLG
FTKQGLFLMALGLGDRLNELSNNQGFSVEEVFRRREALHSLIDPIGLGNFGVLVQSKSLSEEEKKQTLKGLSMPPMG

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=350, Percent_Identity=28, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24645885, Length=373, Percent_Identity=27.3458445040214, Blast_Score=105, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45784; Mature: 45784

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPQLTISNNNENLCTIIYKSISESQNKRITFAEYMDLVLYHPQYGYYATHPVNIGKQG
CCCCCEEEECCCCCEEEEEEHHHCCCCCCEEEHHHHHHHHEECCCCCCEEECCCCCCCCC
DFLTSPHWGSDFGELLAEQFLQMWHILQRPNNFTIVEMGAGQGILAEQILGYLKQKHLDF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
FQTVEYLIVEKSEVLKVQQKQILQSYQVRWSDWDKISHSSITGCFFSNELVDAFPVHKFR
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHCCCHHEE
IEEREIKEIYVSSNSQGKFVEITDKISTPEIAEYFNLVDIDLLSFVDVEGYQSEVNLQAL
CCHHHHHEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
DWIKIVSNKLLKGYLLTIDYGYQAVRYYNPVRKEGTLQCYYQHHRNNDPYWNVGRQDITA
HHHHHHHHHHHCEEEEEEECCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEE
HVDFTALEKQGNLLDLETLGFTKQGLFLMALGLGDRLNELSNNQGFSVEEVFRRREALHS
EEEEEEECCCCCEEEEHHCCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHH
LIDPIGLGNFGVLVQSKSLSEEEKKQTLKGLSMPPMG
HHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNQPQLTISNNNENLCTIIYKSISESQNKRITFAEYMDLVLYHPQYGYYATHPVNIGKQG
CCCCCEEEECCCCCEEEEEEHHHCCCCCCEEEHHHHHHHHEECCCCCCEEECCCCCCCCC
DFLTSPHWGSDFGELLAEQFLQMWHILQRPNNFTIVEMGAGQGILAEQILGYLKQKHLDF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
FQTVEYLIVEKSEVLKVQQKQILQSYQVRWSDWDKISHSSITGCFFSNELVDAFPVHKFR
HHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHCCCHHEE
IEEREIKEIYVSSNSQGKFVEITDKISTPEIAEYFNLVDIDLLSFVDVEGYQSEVNLQAL
CCHHHHHEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
DWIKIVSNKLLKGYLLTIDYGYQAVRYYNPVRKEGTLQCYYQHHRNNDPYWNVGRQDITA
HHHHHHHHHHHCEEEEEEECCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEE
HVDFTALEKQGNLLDLETLGFTKQGLFLMALGLGDRLNELSNNQGFSVEEVFRRREALHS
EEEEEEECCCCCEEEEHHCCCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHH
LIDPIGLGNFGVLVQSKSLSEEEKKQTLKGLSMPPMG
HHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA