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The map label for this gene is 113478162

Identifier: 113478162

GI number: 113478162

Start: 7378210

End: 7378608

Strand: Reverse

Name: 113478162

Synonym: Tery_4799

Alternate gene names: NA

Gene position: 7378608-7378210 (Counterclockwise)

Preceding gene: 113478163

Following gene: 113478160

Centisome position: 95.21

GC content: 39.85

Gene sequence:

>399_bases
TTGAAAACAGGTGAGCAGCGTGTTAAAATTGCTACATTGCTTTCTGAAAATGAAAAAAAAATTGTGGACAAAGCTAGTCA
GGACTTATGGCGCAGGCGTCCAGATTTTATTGCCCCTGGTGGTAATGCTTTTGGTCAACGCGAACGTGCTTTATGTCTTC
GTGACTATGGTTGGTACCTGCGTTTGATTACTTATGGGCTATTAGCTGGGGATAAAGATCCTATTGAAAGTATTGGTTTG
ATAGGTGTTCGGGAAATGTATAACTCTCTTGGTGTACCGGTTCCTGGAATGGTAGAGTCGATTCGTTGTTTAAAGGAAGC
AAGTCTTTCTTTACTTGATGAAGAGGATGCTAAGGAAACTGCTCCTTATTTTGACTATATTATTCAAGCAATGTCTTAA

Upstream 100 bases:

>100_bases
ACTTATCTGGCTTAGTTTAACAGTTAGTCAAGTTATTCTCAAAGCAGATGATGAATTACGTTACCCCAGTAGTGGGGAAC
TTGAAGCCATAAATACTTTT

Downstream 100 bases:

>100_bases
TTTTTTTGGCTTCTTGTAGCTTTTTTGTTCTCTAGGTAGGGATTTTATCACTAAATCCCTACAGACAATTTTTTTGAGTT
TTGAATAAGAAATAACTCCC

Product: phycobilisome protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKTGEQRVKIATLLSENEKKIVDKASQDLWRRRPDFIAPGGNAFGQRERALCLRDYGWYLRLITYGLLAGDKDPIESIGL
IGVREMYNSLGVPVPGMVESIRCLKEASLSLLDEEDAKETAPYFDYIIQAMS

Sequences:

>Translated_132_residues
MKTGEQRVKIATLLSENEKKIVDKASQDLWRRRPDFIAPGGNAFGQRERALCLRDYGWYLRLITYGLLAGDKDPIESIGL
IGVREMYNSLGVPVPGMVESIRCLKEASLSLLDEEDAKETAPYFDYIIQAMS
>Mature_132_residues
MKTGEQRVKIATLLSENEKKIVDKASQDLWRRRPDFIAPGGNAFGQRERALCLRDYGWYLRLITYGLLAGDKDPIESIGL
IGVREMYNSLGVPVPGMVESIRCLKEASLSLLDEEDAKETAPYFDYIIQAMS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the core of the phycobilisome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 14886; Mature: 14886

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGEQRVKIATLLSENEKKIVDKASQDLWRRRPDFIAPGGNAFGQRERALCLRDYGWYL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RLITYGLLAGDKDPIESIGLIGVREMYNSLGVPVPGMVESIRCLKEASLSLLDEEDAKET
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
APYFDYIIQAMS
CHHHHHHHHHCC
>Mature Secondary Structure
MKTGEQRVKIATLLSENEKKIVDKASQDLWRRRPDFIAPGGNAFGQRERALCLRDYGWYL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RLITYGLLAGDKDPIESIGLIGVREMYNSLGVPVPGMVESIRCLKEASLSLLDEEDAKET
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
APYFDYIIQAMS
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA