Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478160

Identifier: 113478160

GI number: 113478160

Start: 7374757

End: 7375392

Strand: Reverse

Name: 113478160

Synonym: Tery_4797

Alternate gene names: NA

Gene position: 7375392-7374757 (Counterclockwise)

Preceding gene: 113478162

Following gene: 113478159

Centisome position: 95.17

GC content: 39.78

Gene sequence:

>636_bases
ATGAGCCAAAAGTGGGCTGTGTTTAGTGCTGCCATATTTCTAGTGACAGTGCCAGTATTTTTTCAAGCTCCAATGGTACG
TCAACTACCTTGGTTAAGTTTAGTTATGACAGGCTTTTGGTTATGGCTAAGTTTAAAATTGCTTAAAAAGAGAGCTACTA
ATTTATGGGGTGATTTATTGCTAGGGTTTACTTGGAGTTGGTTCACAGGTTCGATATACTGGGGTTGGCTACGACAGGAA
CCATTTCTCCATTTACCAGTTGAAGCAATGTTTGTACCTTGGGCATTATGGTGTTTAAGCCACAATAGAGAAATGGTAGG
GAACTGTTTTTATTTAGGCTCTCTACTAGGCACAGCAGTTACAGACGGATATTTCTATATAACTGGTCTGATTCCTTATT
GGCGGAGTTTAATGATAGTTGAACCAGAAATGGCTTTAGAAGTATTTCAAGATGCTTTAACTCAAGTGCGTACTTCCTGG
GGGGTAACTTGGATTATTCTGTTAGTAGGAATTCTTTTGTTTTTTGGTCTTGTACCTTTGCAGTCTAAAAGCTTACACTG
GTGGGCCTTTGGCGCAGCAGTATTGAGCACTATTGTAGTAGATAGTCTGTTTTTGTTGGCTGCTTTTGTGGCCTAA

Upstream 100 bases:

>100_bases
AAAAACCTTGTTTAATAATGCTTTTTTTGATATAATAACTAACTTTTTTCCAGAAAAGCAGGAAAAAATTTTTTTTGCTT
TTGTTTTAGAAAAAATTAAA

Downstream 100 bases:

>100_bases
GACAAAATTTCAGAGGGCTAGTAATTGTTGACTATAATCTAGCATTATCATAGATAATCTTTAATTATCTTTAGTCATAC
TACTTGGATTCACAACTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSQKWAVFSAAIFLVTVPVFFQAPMVRQLPWLSLVMTGFWLWLSLKLLKKRATNLWGDLLLGFTWSWFTGSIYWGWLRQE
PFLHLPVEAMFVPWALWCLSHNREMVGNCFYLGSLLGTAVTDGYFYITGLIPYWRSLMIVEPEMALEVFQDALTQVRTSW
GVTWIILLVGILLFFGLVPLQSKSLHWWAFGAAVLSTIVVDSLFLLAAFVA

Sequences:

>Translated_211_residues
MSQKWAVFSAAIFLVTVPVFFQAPMVRQLPWLSLVMTGFWLWLSLKLLKKRATNLWGDLLLGFTWSWFTGSIYWGWLRQE
PFLHLPVEAMFVPWALWCLSHNREMVGNCFYLGSLLGTAVTDGYFYITGLIPYWRSLMIVEPEMALEVFQDALTQVRTSW
GVTWIILLVGILLFFGLVPLQSKSLHWWAFGAAVLSTIVVDSLFLLAAFVA
>Mature_210_residues
SQKWAVFSAAIFLVTVPVFFQAPMVRQLPWLSLVMTGFWLWLSLKLLKKRATNLWGDLLLGFTWSWFTGSIYWGWLRQEP
FLHLPVEAMFVPWALWCLSHNREMVGNCFYLGSLLGTAVTDGYFYITGLIPYWRSLMIVEPEMALEVFQDALTQVRTSWG
VTWIILLVGILLFFGLVPLQSKSLHWWAFGAAVLSTIVVDSLFLLAAFVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24221; Mature: 24090

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKWAVFSAAIFLVTVPVFFQAPMVRQLPWLSLVMTGFWLWLSLKLLKKRATNLWGDLL
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFTWSWFTGSIYWGWLRQEPFLHLPVEAMFVPWALWCLSHNREMVGNCFYLGSLLGTAV
HHHHHHHHHCCEEEEECCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TDGYFYITGLIPYWRSLMIVEPEMALEVFQDALTQVRTSWGVTWIILLVGILLFFGLVPL
CCCHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QSKSLHWWAFGAAVLSTIVVDSLFLLAAFVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SQKWAVFSAAIFLVTVPVFFQAPMVRQLPWLSLVMTGFWLWLSLKLLKKRATNLWGDLL
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFTWSWFTGSIYWGWLRQEPFLHLPVEAMFVPWALWCLSHNREMVGNCFYLGSLLGTAV
HHHHHHHHHCCEEEEECCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
TDGYFYITGLIPYWRSLMIVEPEMALEVFQDALTQVRTSWGVTWIILLVGILLFFGLVPL
CCCHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QSKSLHWWAFGAAVLSTIVVDSLFLLAAFVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA