| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478155
Identifier: 113478155
GI number: 113478155
Start: 7365942
End: 7366250
Strand: Reverse
Name: 113478155
Synonym: Tery_4792
Alternate gene names: NA
Gene position: 7366250-7365942 (Counterclockwise)
Preceding gene: 113478157
Following gene: 113478154
Centisome position: 95.05
GC content: 27.51
Gene sequence:
>309_bases ATGGCAATATTTATGGGCATGGAAAATGCTTATCCAATTGGTAAAGATATTAGTAATGTTCAATTTTTCTATCACCAAGG GATTAGATATAAAATAATAACTCATACCCAAAATAATGAGCTTGGTGATTCTTCTACATATCAAAAACAAAAATGGAATG GCTTAAGTTACCATGGGAAAAAAGTTATCAAAGAAATAAATATTTTGGGTATCATGGTTGATATTTATCATGTCTATAAT TATACATTTTTGGATTTAATTAAGTTAATAAAAGCACCAGTAATTGCATCTCATTCTAGTGCTAGATAA
Upstream 100 bases:
>100_bases AATGATTAAAATAACAAAAAAGATGGTTGAGTTCAATTTTTTTTAAATTTTACTTGCCTTAAATGCACAGGATGCTGAAC TGCTAGATAAAATTATAAAA
Downstream 100 bases:
>100_bases CTAGAAAAAAAATCCTAAAATATGAGTAATTAAATTTTAAAAATTGTCAAATAAAATGATGTAGTTGTACAAAATTGTAT TTTTGATGACTATATTAAAA
Product: periplasmic dipeptidase
Products: NA
Alternate protein names: Dipeptidase; Glutamine Amidotransferase Class II/Dipeptidase; Peptidase; Glutamine Amidotransferase; Periplasmic Dipeptidase; Renal Dipeptidase Superfamily; Microsomal Dipeptidase; Amma-Glutamyl Hydrolase Family Peptidase; Renal Dipeptidase Family Protein; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Microsomal Dipeptidase-Like Protein; Zn-Dependent Dipeptidase; LOW QUALITY PROTEIN Dipeptidase; Dipeptidase Family Protein
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGKKVIKEINILGIMVDIYHVYN YTFLDLIKLIKAPVIASHSSAR
Sequences:
>Translated_102_residues MAIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGKKVIKEINILGIMVDIYHVYN YTFLDLIKLIKAPVIASHSSAR >Mature_101_residues AIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGKKVIKEINILGIMVDIYHVYNY TFLDLIKLIKAPVIASHSSAR
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11641269, Length=106, Percent_Identity=35.8490566037736, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI189458885, Length=106, Percent_Identity=36.7924528301887, Blast_Score=69, Evalue=9e-13, Organism=Homo sapiens, GI4758190, Length=106, Percent_Identity=36.7924528301887, Blast_Score=69, Evalue=9e-13, Organism=Homo sapiens, GI193211610, Length=106, Percent_Identity=32.0754716981132, Blast_Score=65, Evalue=1e-11, Organism=Homo sapiens, GI193211608, Length=106, Percent_Identity=32.0754716981132, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI281362638, Length=105, Percent_Identity=40, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI281362636, Length=105, Percent_Identity=40, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI161083233, Length=102, Percent_Identity=35.2941176470588, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI221475880, Length=100, Percent_Identity=38, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11784; Mature: 11653
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGK CEEEECCCCCCCCCCCCCHHHEEEECCCEEEEEEECCCCCCCCCCCCHHHCCCCCCHHHH KVIKEINILGIMVDIYHVYNYTFLDLIKLIKAPVIASHSSAR HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGK EEEECCCCCCCCCCCCCHHHEEEECCCEEEEEEECCCCCCCCCCCCHHHCCCCCCHHHH KVIKEINILGIMVDIYHVYNYTFLDLIKLIKAPVIASHSSAR HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA