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The map label for this gene is yfdV [C]

Identifier: 113478154

GI number: 113478154

Start: 7364470

End: 7365378

Strand: Reverse

Name: yfdV [C]

Synonym: Tery_4791

Alternate gene names: 113478154

Gene position: 7365378-7364470 (Counterclockwise)

Preceding gene: 113478155

Following gene: 113478152

Centisome position: 95.04

GC content: 33.11

Gene sequence:

>909_bases
ATGATTGAGATTTTCTTTTCCGTTGTATCTGCTGTTTTTCCAGTGGGGTGTATAGTTTTAATTGGTTTTATATTTGGCAA
AAATTTTTCCATTGATGAACAGACACTTTCTCAGCTAGCTTTGTATGTTTTGTTTCCTGCATTATTAACCGATATAATGT
ATCAAACTACTATGAGAATTGAGGAAGCAATAGGGATATTTATAGCCTTTGGGTTAACTTATATTTTACTTTGTTTAATT
CCTTGGGGAATAGGAAGACGGTTAGGTTTTTCGGAGTCTCTGCAAAAAAGTTTATTGGCGACTACAGCTTTACCTAATTC
TGGAAACATGGGGTTACCTGTAGCTTTATTTGCATTAGGAGAAGCTGGGTTAGAAAGGGCTATAATTTATTTAATATCAT
GGAATTTAATTGTGTTTAGTACAATGCCTGCCATTCTCAAAGGAGGGGGGTTTCGATCTGGTATTATTTTTACTTTTAAA
TTACCGATAATTTGGGGAATGATTTTAGGTGTAATTCTTAACTTATTCAATATTGAATTACCTTTAAAACTTGATGATGG
TTTACATATTTTGAGAGAAGCTGCAATTCCAATTTCTTTATTATTGATGGGAATACAAATATCTAAAAATCGTTTTCAAC
CAGGTACTTATGAGTTAGGTGCTAGTTTAATTCGTTTGTTTGGAGGAGCATTTGTTGCTTATTTAGTTGGTAAAATTATG
AACTTGGAAATGCTTGATTTACAAGTGTTAGTATTAGAAAGTGCTATGCCAAGTGCTTTAGCTTCTTTTTTAATAGTTAA
TGAATTTGGTGGGGATGCGACACGAACTTCTAGAGTTGTGATAATATCAACGCTTTTATCTTTTTTGACTTTACCGATAG
TCTTGTGGGCAATTGGGGCAACATCTTGA

Upstream 100 bases:

>100_bases
AGAGTTTTTAGTGAAGTGCAAAAGATGTCTAGATAAATTCAAAACTAAGAAATATCCGGGAAATAACTTTGTACAATGAT
TGACTTATAATTTTTTTAGT

Downstream 100 bases:

>100_bases
TGTATAAGCATTCATGTCTTACCAGTCAGCTATAGTGTTTTCTAATGAGGTGTAAATTTATATTTAAGTTTTTTCTAAGA
AAAAAAGCACTGGATGCGAA

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MIEIFFSVVSAVFPVGCIVLIGFIFGKNFSIDEQTLSQLALYVLFPALLTDIMYQTTMRIEEAIGIFIAFGLTYILLCLI
PWGIGRRLGFSESLQKSLLATTALPNSGNMGLPVALFALGEAGLERAIIYLISWNLIVFSTMPAILKGGGFRSGIIFTFK
LPIIWGMILGVILNLFNIELPLKLDDGLHILREAAIPISLLLMGIQISKNRFQPGTYELGASLIRLFGGAFVAYLVGKIM
NLEMLDLQVLVLESAMPSALASFLIVNEFGGDATRTSRVVIISTLLSFLTLPIVLWAIGATS

Sequences:

>Translated_302_residues
MIEIFFSVVSAVFPVGCIVLIGFIFGKNFSIDEQTLSQLALYVLFPALLTDIMYQTTMRIEEAIGIFIAFGLTYILLCLI
PWGIGRRLGFSESLQKSLLATTALPNSGNMGLPVALFALGEAGLERAIIYLISWNLIVFSTMPAILKGGGFRSGIIFTFK
LPIIWGMILGVILNLFNIELPLKLDDGLHILREAAIPISLLLMGIQISKNRFQPGTYELGASLIRLFGGAFVAYLVGKIM
NLEMLDLQVLVLESAMPSALASFLIVNEFGGDATRTSRVVIISTLLSFLTLPIVLWAIGATS
>Mature_302_residues
MIEIFFSVVSAVFPVGCIVLIGFIFGKNFSIDEQTLSQLALYVLFPALLTDIMYQTTMRIEEAIGIFIAFGLTYILLCLI
PWGIGRRLGFSESLQKSLLATTALPNSGNMGLPVALFALGEAGLERAIIYLISWNLIVFSTMPAILKGGGFRSGIIFTFK
LPIIWGMILGVILNLFNIELPLKLDDGLHILREAAIPISLLLMGIQISKNRFQPGTYELGASLIRLFGGAFVAYLVGKIM
NLEMLDLQVLVLESAMPSALASFLIVNEFGGDATRTSRVVIISTLLSFLTLPIVLWAIGATS

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 32887; Mature: 32887

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIFFSVVSAVFPVGCIVLIGFIFGKNFSIDEQTLSQLALYVLFPALLTDIMYQTTMRI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAIGIFIAFGLTYILLCLIPWGIGRRLGFSESLQKSLLATTALPNSGNMGLPVALFALG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
EAGLERAIIYLISWNLIVFSTMPAILKGGGFRSGIIFTFKLPIIWGMILGVILNLFNIEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
PLKLDDGLHILREAAIPISLLLMGIQISKNRFQPGTYELGASLIRLFGGAFVAYLVGKIM
CEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NLEMLDLQVLVLESAMPSALASFLIVNEFGGDATRTSRVVIISTLLSFLTLPIVLWAIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TS
CC
>Mature Secondary Structure
MIEIFFSVVSAVFPVGCIVLIGFIFGKNFSIDEQTLSQLALYVLFPALLTDIMYQTTMRI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAIGIFIAFGLTYILLCLIPWGIGRRLGFSESLQKSLLATTALPNSGNMGLPVALFALG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
EAGLERAIIYLISWNLIVFSTMPAILKGGGFRSGIIFTFKLPIIWGMILGVILNLFNIEL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCC
PLKLDDGLHILREAAIPISLLLMGIQISKNRFQPGTYELGASLIRLFGGAFVAYLVGKIM
CEEECCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NLEMLDLQVLVLESAMPSALASFLIVNEFGGDATRTSRVVIISTLLSFLTLPIVLWAIGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]