Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478155

Identifier: 113478155

GI number: 113478155

Start: 7365942

End: 7366250

Strand: Reverse

Name: 113478155

Synonym: Tery_4792

Alternate gene names: NA

Gene position: 7366250-7365942 (Counterclockwise)

Preceding gene: 113478157

Following gene: 113478154

Centisome position: 95.05

GC content: 27.51

Gene sequence:

>309_bases
ATGGCAATATTTATGGGCATGGAAAATGCTTATCCAATTGGTAAAGATATTAGTAATGTTCAATTTTTCTATCACCAAGG
GATTAGATATAAAATAATAACTCATACCCAAAATAATGAGCTTGGTGATTCTTCTACATATCAAAAACAAAAATGGAATG
GCTTAAGTTACCATGGGAAAAAAGTTATCAAAGAAATAAATATTTTGGGTATCATGGTTGATATTTATCATGTCTATAAT
TATACATTTTTGGATTTAATTAAGTTAATAAAAGCACCAGTAATTGCATCTCATTCTAGTGCTAGATAA

Upstream 100 bases:

>100_bases
AATGATTAAAATAACAAAAAAGATGGTTGAGTTCAATTTTTTTTAAATTTTACTTGCCTTAAATGCACAGGATGCTGAAC
TGCTAGATAAAATTATAAAA

Downstream 100 bases:

>100_bases
CTAGAAAAAAAATCCTAAAATATGAGTAATTAAATTTTAAAAATTGTCAAATAAAATGATGTAGTTGTACAAAATTGTAT
TTTTGATGACTATATTAAAA

Product: periplasmic dipeptidase

Products: NA

Alternate protein names: Dipeptidase; Glutamine Amidotransferase Class II/Dipeptidase; Peptidase; Glutamine Amidotransferase; Periplasmic Dipeptidase; Renal Dipeptidase Superfamily; Microsomal Dipeptidase; Amma-Glutamyl Hydrolase Family Peptidase; Renal Dipeptidase Family Protein; Zn-Dependent Dipeptidase Microsomal Dipeptidase; Microsomal Dipeptidase-Like Protein; Zn-Dependent Dipeptidase; LOW QUALITY PROTEIN Dipeptidase; Dipeptidase Family Protein

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MAIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGKKVIKEINILGIMVDIYHVYN
YTFLDLIKLIKAPVIASHSSAR

Sequences:

>Translated_102_residues
MAIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGKKVIKEINILGIMVDIYHVYN
YTFLDLIKLIKAPVIASHSSAR
>Mature_101_residues
AIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGKKVIKEINILGIMVDIYHVYNY
TFLDLIKLIKAPVIASHSSAR

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11641269, Length=106, Percent_Identity=35.8490566037736, Blast_Score=71, Evalue=2e-13,
Organism=Homo sapiens, GI189458885, Length=106, Percent_Identity=36.7924528301887, Blast_Score=69, Evalue=9e-13,
Organism=Homo sapiens, GI4758190, Length=106, Percent_Identity=36.7924528301887, Blast_Score=69, Evalue=9e-13,
Organism=Homo sapiens, GI193211610, Length=106, Percent_Identity=32.0754716981132, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI193211608, Length=106, Percent_Identity=32.0754716981132, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281362638, Length=105, Percent_Identity=40, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281362636, Length=105, Percent_Identity=40, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161083233, Length=102, Percent_Identity=35.2941176470588, Blast_Score=71, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221475880, Length=100, Percent_Identity=38, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11784; Mature: 11653

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGK
CEEEECCCCCCCCCCCCCHHHEEEECCCEEEEEEECCCCCCCCCCCCHHHCCCCCCHHHH
KVIKEINILGIMVDIYHVYNYTFLDLIKLIKAPVIASHSSAR
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AIFMGMENAYPIGKDISNVQFFYHQGIRYKIITHTQNNELGDSSTYQKQKWNGLSYHGK
EEEECCCCCCCCCCCCCHHHEEEECCCEEEEEEECCCCCCCCCCCCHHHCCCCCCHHHH
KVIKEINILGIMVDIYHVYNYTFLDLIKLIKAPVIASHSSAR
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA