| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113478133
Identifier: 113478133
GI number: 113478133
Start: 7320747
End: 7322795
Strand: Reverse
Name: 113478133
Synonym: Tery_4767
Alternate gene names: NA
Gene position: 7322795-7320747 (Counterclockwise)
Preceding gene: 113478134
Following gene: 113478132
Centisome position: 94.49
GC content: 31.14
Gene sequence:
>2049_bases ATGAACTACTATGAATTAGGAGAAAAATTTCTAGAACAACAACAGTGGGAGAAAGCTGTTACTAGCTACCGCCAAGCTAT AAAATTAAACCCTACTTTTTCTTGGCATTACTACAAATTAGGGCAAGCTTTAACTCAACTACAAAAATGGGATGAAGCTA TTACTAATTACCAAAAAGCTATAGAACTAAATTCTGATTTTCCTTGGTCTTATCATCACTTAGGAAATGCTTTACTAAAA CAGGAAAAATGGGAAGAAGCAGTTAATGCTTACCACAATTTTATTAAACTTAATTCTGATAATTATTGGGCTTACCATAA ATTAGGAGAAGCCTTATTTAAAATAGGAGAATTTGACGCCGCAATTATTTCCTATCAAAAAGCCATTAAAATTAATCCAG AAATTAAAGGAACTCATCAAAAATTAGCAGATATTTTATTTCATATTGGTCAGCTAGAAGCAGCAGAAATCGCATATCGT AAGGCCATAAAACTCAATCCAGAAGTAGTTTGGTATCGCCAATGTTTAGGAGATGTTTTACTTAGACAAAAAAGATTAGA CGAAGCGATCGCTACTTATTTAGAAGTTGCTAAAGTTAGCCATAATCTAACTTGGATGCACCTACAGTTAGGAGATGCTT TTGCTCAACTTTGTCAATCAAATTTAGACGAAACTATCAATTACTATTGCCAAGCCATTAAAAATCCCAATCAATATCCG ATTTATCAAAAATCACTATATTTAATCAAAACAAATCCAGAAATATATCTAGAATTAGGAAATTATCTAGCACAAAAAAA TCAAATTTATGGAGCCATAATTATTTATTACTTGTTGCTAGAAATATTACCCATTCAAATAAATATTCATCAGCAACTTG ACCAGATATTCCGGCAAAAAAATCAACTAGAACAACAGCTAAATTCATTTTATTCTGCCGTTAAAACTGACGGAAATAGT CAATCTTACTATCACCTAGGATTAGCATTAACTAAACAACAAAAATGGTTAGAAGCTACCATAATCTACCATCGTGCTAT AGAAATTAATCCTGATTTTGCTTGGTGGTCTGATATTCGTCTGTGGGAAACTTTTAGAAAGCAAGATAAACTCCAAAAAA TAGTTGATTTGTTTCAAGAATTTATTAGTTTTCCAAATAACTCACTCTGTCGTTATCTCAATTTAGCTGAAGCTCTAACT CAAGTAAATAGAAATACTGAAGCACTAGAAATTTATCAAAATGCTTCTCAACAACAAATTCAACAAAACTATCCTAACTT TTTTCTAAAATCCCAAAAGTCCCCTCAAATATTAGGACCTAATTTTCTAGTAATTGGAGTTAAGAAAGGAGGAACTACAT CTATTTATCATTATCTAATTCAACATCCACAAATTTTACCTGGAATCAAAAAAGAAATTGATTTTTGGTCTTTCTATTTC CATCGAGGTTTAGATTGGTATCGGGCACATTTTCCATCAATTCCAGAGTCAGAAAAATACTTAACTGGAGAAGCAAGTCC TAGTTATTTTGATGCTCCAGATGTTCCCGCTAGACTATTTCATTTTTTCCCCAGAATTAAACTAATTGTTTTATTAAGAA ATCCAGTGGATAGAACTATATCTAATTACTATCATGAAGTACGTTCACAAGCAGAGAGCATGTCTATTGAAGAGGTAATT AATTCTAGGCTGGAAAAACTGAACAAAATTTCATCTAGTTTTATCACAGAAAAAGATTATTGGAATTATCAGGGAGATTA TATAGCTTCTAGTATTTATTTAGATTGGCTGAAGAAATGGTTGAATATTTTTCCCAGAGAACAATTATTAATTTTGCCTA GTGAAAAATTTTATAGTCAGCCAAAAACCATAATGAAGCAAGTTTTCAATTTTCTAGATTTGCCAGATTATCAAATACAA GATTATCCAAAATTTAATGCTGCTTCTTATGCGTCTATTAGTAAATCACTTCGACAAAAATTAAACGATTATTTTCAGTC TCATAATCAGCGTTTAGAGGAATATCTGGGTATAAAATTTGGTTGGTAA
Upstream 100 bases:
>100_bases CGAATTATTGAGAAATTTTACTCAGAAGGAATATTATAAGAGAAAATAAATCTAAAAGATCTGAAATGCTTCTATATAAA ATTTAATTGGGAAACTAGAG
Downstream 100 bases:
>100_bases AAGAAGGTATTAGATTCAGATACCAATTTCCCCAGTAAAATTATAGAATTTATTGAATATTTGTACTTGTTTTAATTTTC TTTTTTTGAGGTTATTTTCC
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKAIELNSDFPWSYHHLGNALLK QEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDAAIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYR KAIKLNPEVVWYRQCLGDVLLRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQKNQLEQQLNSFYSAVKTDGNS QSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIRLWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALT QVNRNTEALEIYQNASQQQIQQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTISNYYHEVRSQAESMSIEEVI NSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKWLNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQ DYPKFNAASYASISKSLRQKLNDYFQSHNQRLEEYLGIKFGW
Sequences:
>Translated_682_residues MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKAIELNSDFPWSYHHLGNALLK QEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDAAIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYR KAIKLNPEVVWYRQCLGDVLLRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQKNQLEQQLNSFYSAVKTDGNS QSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIRLWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALT QVNRNTEALEIYQNASQQQIQQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTISNYYHEVRSQAESMSIEEVI NSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKWLNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQ DYPKFNAASYASISKSLRQKLNDYFQSHNQRLEEYLGIKFGW >Mature_682_residues MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKAIELNSDFPWSYHHLGNALLK QEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDAAIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYR KAIKLNPEVVWYRQCLGDVLLRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQKNQLEQQLNSFYSAVKTDGNS QSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIRLWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALT QVNRNTEALEIYQNASQQQIQQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTISNYYHEVRSQAESMSIEEVI NSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKWLNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQ DYPKFNAASYASISKSLRQKLNDYFQSHNQRLEEYLGIKFGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 9 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=351, Percent_Identity=27.6353276353276, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI32307148, Length=351, Percent_Identity=27.6353276353276, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI5174463, Length=267, Percent_Identity=27.7153558052434, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI12007650, Length=266, Percent_Identity=27.8195488721804, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI4758766, Length=270, Percent_Identity=28.1481481481481, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI116089312, Length=267, Percent_Identity=26.5917602996255, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI4505353, Length=266, Percent_Identity=27.0676691729323, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI5174465, Length=268, Percent_Identity=26.4925373134328, Blast_Score=99, Evalue=2e-20, Organism=Homo sapiens, GI104876423, Length=195, Percent_Identity=33.3333333333333, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI5174467, Length=268, Percent_Identity=26.4925373134328, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI45267824, Length=268, Percent_Identity=27.2388059701493, Blast_Score=97, Evalue=6e-20, Organism=Homo sapiens, GI4826764, Length=271, Percent_Identity=26.1992619926199, Blast_Score=97, Evalue=8e-20, Organism=Homo sapiens, GI4505351, Length=270, Percent_Identity=25.5555555555556, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI301336134, Length=358, Percent_Identity=23.463687150838, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI83415184, Length=358, Percent_Identity=23.7430167597765, Blast_Score=77, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115532690, Length=365, Percent_Identity=26.5753424657534, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI115532692, Length=351, Percent_Identity=27.0655270655271, Blast_Score=117, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71986098, Length=268, Percent_Identity=25.3731343283582, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17533853, Length=210, Percent_Identity=28.0952380952381, Blast_Score=92, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71991175, Length=204, Percent_Identity=29.9019607843137, Blast_Score=92, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6319387, Length=175, Percent_Identity=25.1428571428571, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI17647755, Length=351, Percent_Identity=27.3504273504274, Blast_Score=118, Evalue=2e-26, Organism=Drosophila melanogaster, GI24585827, Length=351, Percent_Identity=27.3504273504274, Blast_Score=118, Evalue=2e-26, Organism=Drosophila melanogaster, GI24585829, Length=351, Percent_Identity=27.3504273504274, Blast_Score=118, Evalue=2e-26, Organism=Drosophila melanogaster, GI24643211, Length=267, Percent_Identity=27.3408239700375, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI281365711, Length=212, Percent_Identity=29.2452830188679, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI17736971, Length=212, Percent_Identity=29.2452830188679, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI28573557, Length=116, Percent_Identity=37.9310344827586, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647123, Length=195, Percent_Identity=26.1538461538462, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF00515 TPR_1; PF07719 TPR_2 [H]
EC number: NA
Molecular weight: Translated: 80757; Mature: 80757
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKA CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IELNSDFPWSYHHLGNALLKQEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCHHH AIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYRKAIKLNPEVVWYRQCLGDVL HHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH LRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP HHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQK CEECEEEEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH NQLEQQLNSFYSAVKTDGNSQSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIR HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEECCCCCCHHHHH LWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALTQVNRNTEALEIYQNASQQQI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH QQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF HHCCCCCEECCCCCCCEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTI HHCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHH SNYYHEVRSQAESMSIEEVINSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKW HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQDYPKFNAASYASISKSLRQK HHHCCCCCEEEECCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH LNDYFQSHNQRLEEYLGIKFGW HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNYYELGEKFLEQQQWEKAVTSYRQAIKLNPTFSWHYYKLGQALTQLQKWDEAITNYQKA CCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IELNSDFPWSYHHLGNALLKQEKWEEAVNAYHNFIKLNSDNYWAYHKLGEALFKIGEFDA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCHHH AIISYQKAIKINPEIKGTHQKLADILFHIGQLEAAEIAYRKAIKLNPEVVWYRQCLGDVL HHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH LRQKRLDEAIATYLEVAKVSHNLTWMHLQLGDAFAQLCQSNLDETINYYCQAIKNPNQYP HHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IYQKSLYLIKTNPEIYLELGNYLAQKNQIYGAIIIYYLLLEILPIQINIHQQLDQIFRQK CEECEEEEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH NQLEQQLNSFYSAVKTDGNSQSYYHLGLALTKQQKWLEATIIYHRAIEINPDFAWWSDIR HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHEEEEEEECCCCCCHHHHH LWETFRKQDKLQKIVDLFQEFISFPNNSLCRYLNLAEALTQVNRNTEALEIYQNASQQQI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH QQNYPNFFLKSQKSPQILGPNFLVIGVKKGGTTSIYHYLIQHPQILPGIKKEIDFWSFYF HHCCCCCEECCCCCCCEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH HRGLDWYRAHFPSIPESEKYLTGEASPSYFDAPDVPARLFHFFPRIKLIVLLRNPVDRTI HHCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHH SNYYHEVRSQAESMSIEEVINSRLEKLNKISSSFITEKDYWNYQGDYIASSIYLDWLKKW HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LNIFPREQLLILPSEKFYSQPKTIMKQVFNFLDLPDYQIQDYPKFNAASYASISKSLRQK HHHCCCCCEEEECCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH LNDYFQSHNQRLEEYLGIKFGW HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2105307 [H]