Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478134

Identifier: 113478134

GI number: 113478134

Start: 7323658

End: 7325688

Strand: Reverse

Name: 113478134

Synonym: Tery_4768

Alternate gene names: NA

Gene position: 7325688-7323658 (Counterclockwise)

Preceding gene: 113478135

Following gene: 113478133

Centisome position: 94.52

GC content: 31.41

Gene sequence:

>2031_bases
GTGAATCAGGAAACATCGGCTATCAATTTTAACCAAACAGCAGAGTTTTATTTATCCCAGGGAAAATTAGAAGCAGCTTA
TGAAATTTGTCAAAACATCTTAGGGGATTTACCTAACTTTGCTCCCGCCTACAATACTCAAGGAAAAGTATTACAAGCAA
TGGGAAAAATAGAATCAGCAATTATCAGTTATCGCCAAGCAATAAAATTAAATCCTCAACAAATTGAAACTTATAAAATA
TTAGGAGATATCTTAGTAAAACAAGAACAATTATCTGAAGCGATCGCCTGTTATGAAACAGGTATTAAATATAACCCAAA
AGCATCATTATTTTATCATAAATTAGGCTTAGTATTAATACAACTCAAAAGCTGGGATGAAGCAGTCAGCGCCTTCTGTC
GTGCAATTCAATTTAATCCAAATTTTCCCTGGTCTTACTATAAATTAGGAGAAGCTTTAACTCAACAAAAAAAATGGCAT
CAAGCGGTTATTGCTTATCAACGTTCTATTGAGATTAAACCAGATTTATGTTGGTCTTATCAACATCTAGGTAATGCTCT
AATTAAACAGGGAAAAATAGATCAAGCGATCGCCTATTATCAAGAAATACTTCAACAGCAACCACACCTTGATAGAATTC
ATAAATTATTAGCAGATGCTTTAGTCGAAAAAGGTGAAATTGATGGAGCAATTCCTAATTATCTCAAAGCTATTCAGTTA
AATCCAGATTTTCCTTGGTCTCATGTATGTTTATGGGAAATATTTCTCAAAAAAGATCAATGGAATGAAGCAGTTATTAT
TTATCGCCAAGCAATTAAACTTAACCCTAATGCTTTTTGGTTATGGACTTACTTAGGAAATGCTTTGGTTAAACAAGGAG
ATTTAGAAACAGCAATTACTTGTTATCAAAAAGCTATTTCTATTCAACCCAATATTTCGAAAATTTATCAATTTTTAGGA
GATGCTTTTGTTCAACAACAAAAGTGGGATGAAGCTGCTTTTGCTTATCTGCGTGCTATAGAAATTAACCCAGAATTATC
CTGGTCAAATTATCATTTATGGAATACCTTAGACCGCTGCCATAAATTAGATGCAGTAGTCAATTTATATCGGCAGTTTA
TTAAAAAAAATCCAGATTCATTTTTATCTTATTTACGCCTTGGAAAAATCCTAACAAAACAGAATCAAATAAATGAAGCA
ATTATCTGTTATCAAACTGCTTGTTACCAACAAACTATAAAATCTTATCCCTATCTTTTCAAAAAAAAGTGGGATTTTAC
TGAAGTTAAAAATCCTAATTTTCTGATTATTGGAGTAGGAAAAGGAGGAACTACATCTTTATTTAGTTATCTGATACAAC
ATCCTCAAGTTTTGCCTCCTGTGGTGAAAGAAGTAGATTTTTGGTCAATTAATTTTAAGAACGGTATAAATTGGTATCTG
TCTCATTTTCCTGCTCTTCCTAGCAATCAAAATTTCATCACTGGAGAAGGAAGTCCTAGTTATTTAGGAAATTTGGAAGC
TCCAGGTAGAATATTTAGTTATTTCTCCAAAATCAAGTTAATTATTATTTTGAGAAATCCTGTAGATAGAGCTATTTCTC
ACTACCATTATTGGTTGAGAATAAATAGAGAAAATCGTTTGTTAGAAACTGCATTAAATCAGGAATTAGAAAGTTGGAAA
ATGATTTATAAAAATTCTCCTTTAGATAGCAGTTATTGGCATCATGGATTATATTATTTAGGCACTGGCATATATATAGA
TTTTATCCACAATTGGATGAGCATATTTCCGAAAGAGCAATTTCTGATTTTATCCACAGAAGAATTTTATCGAAATCCAA
AAACTATCATGAAAGAAGTCTTTGATTTTCTCGGTTTGCCAAACTATAATGTTCCCGAATACAATAAATTAAATTTAGGA
TATTATCCCTCTACAAGTAAATCAATGCAACAAAAATTGAGCAATTTCTTTCGACCTCATAATCAAAAGTTGGAGGAGTA
TTTAGGTATGAAATTTAACTGGGAAAGTTGA

Upstream 100 bases:

>100_bases
TCTAATAGTAAATAATCTGAAAAATATTTATAGAATATTATATGATAAACTTTTTCCAATTTTAAAGAATACTGAAATCA
TCTTTCTAGGAAAATTTACA

Downstream 100 bases:

>100_bases
GGTAGATTACTAGGAATCATAACATTTATTGAAAACTTTTATACACTTTTTTACTATGGGAGTAGAGTGGTGGGGGAGTG
AGGGGAATAGAAATTACTCC

Product: sulfotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MNQETSAINFNQTAEFYLSQGKLEAAYEICQNILGDLPNFAPAYNTQGKVLQAMGKIESAIISYRQAIKLNPQQIETYKI
LGDILVKQEQLSEAIACYETGIKYNPKASLFYHKLGLVLIQLKSWDEAVSAFCRAIQFNPNFPWSYYKLGEALTQQKKWH
QAVIAYQRSIEIKPDLCWSYQHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLLADALVEKGEIDGAIPNYLKAIQL
NPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPNAFWLWTYLGNALVKQGDLETAITCYQKAISIQPNISKIYQFLG
DAFVQQQKWDEAAFAYLRAIEINPELSWSNYHLWNTLDRCHKLDAVVNLYRQFIKKNPDSFLSYLRLGKILTKQNQINEA
IICYQTACYQQTIKSYPYLFKKKWDFTEVKNPNFLIIGVGKGGTTSLFSYLIQHPQVLPPVVKEVDFWSINFKNGINWYL
SHFPALPSNQNFITGEGSPSYLGNLEAPGRIFSYFSKIKLIIILRNPVDRAISHYHYWLRINRENRLLETALNQELESWK
MIYKNSPLDSSYWHHGLYYLGTGIYIDFIHNWMSIFPKEQFLILSTEEFYRNPKTIMKEVFDFLGLPNYNVPEYNKLNLG
YYPSTSKSMQQKLSNFFRPHNQKLEEYLGMKFNWES

Sequences:

>Translated_676_residues
MNQETSAINFNQTAEFYLSQGKLEAAYEICQNILGDLPNFAPAYNTQGKVLQAMGKIESAIISYRQAIKLNPQQIETYKI
LGDILVKQEQLSEAIACYETGIKYNPKASLFYHKLGLVLIQLKSWDEAVSAFCRAIQFNPNFPWSYYKLGEALTQQKKWH
QAVIAYQRSIEIKPDLCWSYQHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLLADALVEKGEIDGAIPNYLKAIQL
NPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPNAFWLWTYLGNALVKQGDLETAITCYQKAISIQPNISKIYQFLG
DAFVQQQKWDEAAFAYLRAIEINPELSWSNYHLWNTLDRCHKLDAVVNLYRQFIKKNPDSFLSYLRLGKILTKQNQINEA
IICYQTACYQQTIKSYPYLFKKKWDFTEVKNPNFLIIGVGKGGTTSLFSYLIQHPQVLPPVVKEVDFWSINFKNGINWYL
SHFPALPSNQNFITGEGSPSYLGNLEAPGRIFSYFSKIKLIIILRNPVDRAISHYHYWLRINRENRLLETALNQELESWK
MIYKNSPLDSSYWHHGLYYLGTGIYIDFIHNWMSIFPKEQFLILSTEEFYRNPKTIMKEVFDFLGLPNYNVPEYNKLNLG
YYPSTSKSMQQKLSNFFRPHNQKLEEYLGMKFNWES
>Mature_676_residues
MNQETSAINFNQTAEFYLSQGKLEAAYEICQNILGDLPNFAPAYNTQGKVLQAMGKIESAIISYRQAIKLNPQQIETYKI
LGDILVKQEQLSEAIACYETGIKYNPKASLFYHKLGLVLIQLKSWDEAVSAFCRAIQFNPNFPWSYYKLGEALTQQKKWH
QAVIAYQRSIEIKPDLCWSYQHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLLADALVEKGEIDGAIPNYLKAIQL
NPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPNAFWLWTYLGNALVKQGDLETAITCYQKAISIQPNISKIYQFLG
DAFVQQQKWDEAAFAYLRAIEINPELSWSNYHLWNTLDRCHKLDAVVNLYRQFIKKNPDSFLSYLRLGKILTKQNQINEA
IICYQTACYQQTIKSYPYLFKKKWDFTEVKNPNFLIIGVGKGGTTSLFSYLIQHPQVLPPVVKEVDFWSINFKNGINWYL
SHFPALPSNQNFITGEGSPSYLGNLEAPGRIFSYFSKIKLIIILRNPVDRAISHYHYWLRINRENRLLETALNQELESWK
MIYKNSPLDSSYWHHGLYYLGTGIYIDFIHNWMSIFPKEQFLILSTEEFYRNPKTIMKEVFDFLGLPNYNVPEYNKLNLG
YYPSTSKSMQQKLSNFFRPHNQKLEEYLGMKFNWES

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 9 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=370, Percent_Identity=30.2702702702703, Blast_Score=174, Evalue=3e-43,
Organism=Homo sapiens, GI32307150, Length=370, Percent_Identity=30.2702702702703, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI104876423, Length=278, Percent_Identity=32.7338129496403, Blast_Score=117, Evalue=5e-26,
Organism=Homo sapiens, GI116089312, Length=267, Percent_Identity=28.8389513108614, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI5174465, Length=272, Percent_Identity=29.7794117647059, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI5174467, Length=268, Percent_Identity=29.8507462686567, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI5174463, Length=270, Percent_Identity=30, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI4758766, Length=268, Percent_Identity=32.089552238806, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI301336134, Length=365, Percent_Identity=23.8356164383562, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI45267824, Length=269, Percent_Identity=30.8550185873606, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI83415184, Length=365, Percent_Identity=23.8356164383562, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI12007650, Length=266, Percent_Identity=30.0751879699248, Blast_Score=100, Evalue=9e-21,
Organism=Homo sapiens, GI4826764, Length=267, Percent_Identity=27.7153558052434, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI4505353, Length=268, Percent_Identity=28.7313432835821, Blast_Score=86, Evalue=2e-16,
Organism=Homo sapiens, GI118766330, Length=272, Percent_Identity=25.3676470588235, Blast_Score=86, Evalue=2e-16,
Organism=Homo sapiens, GI118766328, Length=272, Percent_Identity=25.3676470588235, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI45505173, Length=312, Percent_Identity=26.6025641025641, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI4505351, Length=203, Percent_Identity=29.064039408867, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI22749211, Length=339, Percent_Identity=23.8938053097345, Blast_Score=74, Evalue=6e-13,
Organism=Homo sapiens, GI167466177, Length=177, Percent_Identity=25.9887005649718, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI167466175, Length=177, Percent_Identity=25.9887005649718, Blast_Score=67, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=363, Percent_Identity=28.3746556473829, Blast_Score=151, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI115532690, Length=363, Percent_Identity=28.3746556473829, Blast_Score=151, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71991175, Length=268, Percent_Identity=27.2388059701493, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17533853, Length=222, Percent_Identity=31.5315315315315, Blast_Score=90, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71986098, Length=268, Percent_Identity=25.7462686567164, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25147174, Length=259, Percent_Identity=22.7799227799228, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6319589, Length=442, Percent_Identity=20.8144796380091, Blast_Score=67, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6319387, Length=274, Percent_Identity=21.8978102189781, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17647755, Length=370, Percent_Identity=30.2702702702703, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24585827, Length=370, Percent_Identity=30.2702702702703, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24585829, Length=370, Percent_Identity=30.2702702702703, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24643211, Length=270, Percent_Identity=28.1481481481481, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI161076610, Length=333, Percent_Identity=27.3273273273273, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI19920486, Length=333, Percent_Identity=27.3273273273273, Blast_Score=99, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281364285, Length=311, Percent_Identity=25.7234726688103, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24581187, Length=311, Percent_Identity=25.7234726688103, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24647123, Length=269, Percent_Identity=23.4200743494424, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281365711, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17736971, Length=223, Percent_Identity=26.457399103139, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28573557, Length=126, Percent_Identity=38.0952380952381, Blast_Score=71, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 78996; Mature: 78996

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQETSAINFNQTAEFYLSQGKLEAAYEICQNILGDLPNFAPAYNTQGKVLQAMGKIESA
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
IISYRQAIKLNPQQIETYKILGDILVKQEQLSEAIACYETGIKYNPKASLFYHKLGLVLI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEE
QLKSWDEAVSAFCRAIQFNPNFPWSYYKLGEALTQQKKWHQAVIAYQRSIEIKPDLCWSY
EECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLLADALVEKGEIDGAIPNYLKAIQL
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEE
NPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPNAFWLWTYLGNALVKQGDLETAIT
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHEEECCCEEEHHHHHHHHHHCCCCHHHHHH
CYQKAISIQPNISKIYQFLGDAFVQQQKWDEAAFAYLRAIEINPELSWSNYHLWNTLDRC
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHH
HKLDAVVNLYRQFIKKNPDSFLSYLRLGKILTKQNQINEAIICYQTACYQQTIKSYPYLF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHH
KKKWDFTEVKNPNFLIIGVGKGGTTSLFSYLIQHPQVLPPVVKEVDFWSINFKNGINWYL
HCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCHHHH
SHFPALPSNQNFITGEGSPSYLGNLEAPGRIFSYFSKIKLIIILRNPVDRAISHYHYWLR
HHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHEEEEEE
INRENRLLETALNQELESWKMIYKNSPLDSSYWHHGLYYLGTGIYIDFIHNWMSIFPKEQ
ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
FLILSTEEFYRNPKTIMKEVFDFLGLPNYNVPEYNKLNLGYYPSTSKSMQQKLSNFFRPH
EEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCC
NQKLEEYLGMKFNWES
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNQETSAINFNQTAEFYLSQGKLEAAYEICQNILGDLPNFAPAYNTQGKVLQAMGKIESA
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
IISYRQAIKLNPQQIETYKILGDILVKQEQLSEAIACYETGIKYNPKASLFYHKLGLVLI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEE
QLKSWDEAVSAFCRAIQFNPNFPWSYYKLGEALTQQKKWHQAVIAYQRSIEIKPDLCWSY
EECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QHLGNALIKQGKIDQAIAYYQEILQQQPHLDRIHKLLADALVEKGEIDGAIPNYLKAIQL
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEE
NPDFPWSHVCLWEIFLKKDQWNEAVIIYRQAIKLNPNAFWLWTYLGNALVKQGDLETAIT
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEHEEECCCEEEHHHHHHHHHHCCCCHHHHHH
CYQKAISIQPNISKIYQFLGDAFVQQQKWDEAAFAYLRAIEINPELSWSNYHLWNTLDRC
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHH
HKLDAVVNLYRQFIKKNPDSFLSYLRLGKILTKQNQINEAIICYQTACYQQTIKSYPYLF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHH
KKKWDFTEVKNPNFLIIGVGKGGTTSLFSYLIQHPQVLPPVVKEVDFWSINFKNGINWYL
HCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCCHHHH
SHFPALPSNQNFITGEGSPSYLGNLEAPGRIFSYFSKIKLIIILRNPVDRAISHYHYWLR
HHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHEEEEEE
INRENRLLETALNQELESWKMIYKNSPLDSSYWHHGLYYLGTGIYIDFIHNWMSIFPKEQ
ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
FLILSTEEFYRNPKTIMKEVFDFLGLPNYNVPEYNKLNLGYYPSTSKSMQQKLSNFFRPH
EEEEECHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCC
NQKLEEYLGMKFNWES
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 9697413 [H]