Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 113478072

GI number: 113478072

Start: 7218114

End: 7218332

Strand: Reverse

Name: yidD [C]

Synonym: Tery_4697

Alternate gene names: 113478072

Gene position: 7218332-7218114 (Counterclockwise)

Preceding gene: 113478073

Following gene: 113478069

Centisome position: 93.14

GC content: 34.7

Gene sequence:

>219_bases
ATGAAAGTATTATTAGTTAGATTAATTAAAGGTTACAAAATTTTTATTTCGCCAATATTACCCCCATCATGTCGTTTTCA
ACCAACTTGTTCAGAATATGCGATGGAAGCGATAGAAAGATTTGGCATTTTTAAAGGTACTGCAATGGCAGTTATGCGAA
TTTTACGTTGTCATCCCTTTCACCCAGGTGGTTATGATCCTGTACCTCCTAAAAAGTAA

Upstream 100 bases:

>100_bases
GCAGACAACCTCTCTACATAATTATCAACAAAATCTAGCAAGACTTTTGAAATTTGATATCATAGATAATTAACAAAGAT
TTTTGACTTTTTATGTGAAT

Downstream 100 bases:

>100_bases
TAAATAATATTAATTTGTGCCAAAAATTTCCTAACTATCAAGATATTGATGTGTTAGAAAAGGCACTTCAACTATTTCCC
CTTCTACGTCTCCTACTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKVLLVRLIKGYKIFISPILPPSCRFQPTCSEYAMEAIERFGIFKGTAMAVMRILRCHPFHPGGYDPVPPKK

Sequences:

>Translated_72_residues
MKVLLVRLIKGYKIFISPILPPSCRFQPTCSEYAMEAIERFGIFKGTAMAVMRILRCHPFHPGGYDPVPPKK
>Mature_72_residues
MKVLLVRLIKGYKIFISPILPPSCRFQPTCSEYAMEAIERFGIFKGTAMAVMRILRCHPFHPGGYDPVPPKK

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=67, Percent_Identity=58.2089552238806, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4697_TRIEI (Q10VR4)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_724133.1
- STRING:   Q10VR4
- GeneID:   4246351
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_4697
- NMPDR:   fig|203124.1.peg.4438
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   WLATTVI
- BioCyc:   TERY203124:TERY_4697-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 8194; Mature: 8194

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLVRLIKGYKIFISPILPPSCRFQPTCSEYAMEAIERFGIFKGTAMAVMRILRCHPF
CHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
HPGGYDPVPPKK
CCCCCCCCCCCC
>Mature Secondary Structure
MKVLLVRLIKGYKIFISPILPPSCRFQPTCSEYAMEAIERFGIFKGTAMAVMRILRCHPF
CHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
HPGGYDPVPPKK
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA