Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478021

Identifier: 113478021

GI number: 113478021

Start: 7130062

End: 7130967

Strand: Reverse

Name: 113478021

Synonym: Tery_4637

Alternate gene names: NA

Gene position: 7130967-7130062 (Counterclockwise)

Preceding gene: 113478026

Following gene: 113478020

Centisome position: 92.01

GC content: 37.53

Gene sequence:

>906_bases
ATGCTATCTTCAGAGTCCTCATCCCCAATATCACAGTCTGAGGAAACAGCTACTCCCTCAGACAGCTTGTCAACTGACTT
TGTTGTTGAATTCTGGGGTGTGCGAGGTAGTATACCTACCCCCGGTAGCAGCACAGTTCGCTATGGTGGTAATACCTCCT
GTGTAGAAATGCGTGTAGGGGAAAAACGTTTAATTTTTGATGGAGGTACTGGCCTAAGAGTGCTGGGTTTAGAACTACTT
AAGGAAATGCCAGTCGAAGCTCATATATTTTTTAGTCATACCCACTGGGACCATATTCAAGGTTTCCCATTTTTTGTTCC
GGCCTTTTTACCTATTAATAAATTTCACATATATGGGGCCATAGCACCTGATGGTACAACAATTAAGGAATCTTTATCGG
ATCAAATGGTACATCCTAACTTTCCTATTCCTTTACAAATAATGGGTTCGCAGATGAAGTTTTATGATTTTAATAATGGA
GATGTAATTCAGGTTGATGATATTGAAATTGAAACAATTTCTTTAAATCACCCAAATTTTGCTATTGGATATAGAGTGTG
TTGGCAGGGTAAAACTGTAGTTTATTGTCCAGATACAGAACATTATGAAGGTTACTTTGATGAAAATATACTTCATTTAT
CTCGTAATGCTGATTTACTAATTTATGATGCTACCTACACAAATGAAGAGTATTATGATGTTAAATCTCCAAAAATTGGC
TTGGGACATTCTACTTGGGAAGTAGGGGTAGAAATAGCAAGAAAGGCAGGAGTGAAACAAATAGCTATGTTTCAGCACGA
TCCTGGTCATAATGATGATTTATTGGATGAAGTTCAAGTGGCTCTCCAGTCAATATTCTCTAATGGGTTAGTAGCAAAAG
AGGGTATGACAATTCCAATTCTTTAG

Upstream 100 bases:

>100_bases
AGCTAATAAGTAATAACCCATTTTGCTAGAATAAGCTAAATTTAAAATTAAGAAATTTTCCACAGATTTCGTACTAAGCG
AAATTCTAAAACATAGAAAT

Downstream 100 bases:

>100_bases
TCAGGTTCAAAAAATCGTTTTAAAATAGCACAGAGATTATATTTATGTCAAGATCTAATCTCAGGAATAGGTGTAGACAA
AGGCCAACTCTTTTTTTTCT

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Seceted Metal-Dependent Hydrolase; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein; Sulphohydrolase/Glycosulfatase Zn-Dependent Hydrolase

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLSSESSSPISQSEETATPSDSLSTDFVVEFWGVRGSIPTPGSSTVRYGGNTSCVEMRVGEKRLIFDGGTGLRVLGLELL
KEMPVEAHIFFSHTHWDHIQGFPFFVPAFLPINKFHIYGAIAPDGTTIKESLSDQMVHPNFPIPLQIMGSQMKFYDFNNG
DVIQVDDIEIETISLNHPNFAIGYRVCWQGKTVVYCPDTEHYEGYFDENILHLSRNADLLIYDATYTNEEYYDVKSPKIG
LGHSTWEVGVEIARKAGVKQIAMFQHDPGHNDDLLDEVQVALQSIFSNGLVAKEGMTIPIL

Sequences:

>Translated_301_residues
MLSSESSSPISQSEETATPSDSLSTDFVVEFWGVRGSIPTPGSSTVRYGGNTSCVEMRVGEKRLIFDGGTGLRVLGLELL
KEMPVEAHIFFSHTHWDHIQGFPFFVPAFLPINKFHIYGAIAPDGTTIKESLSDQMVHPNFPIPLQIMGSQMKFYDFNNG
DVIQVDDIEIETISLNHPNFAIGYRVCWQGKTVVYCPDTEHYEGYFDENILHLSRNADLLIYDATYTNEEYYDVKSPKIG
LGHSTWEVGVEIARKAGVKQIAMFQHDPGHNDDLLDEVQVALQSIFSNGLVAKEGMTIPIL
>Mature_301_residues
MLSSESSSPISQSEETATPSDSLSTDFVVEFWGVRGSIPTPGSSTVRYGGNTSCVEMRVGEKRLIFDGGTGLRVLGLELL
KEMPVEAHIFFSHTHWDHIQGFPFFVPAFLPINKFHIYGAIAPDGTTIKESLSDQMVHPNFPIPLQIMGSQMKFYDFNNG
DVIQVDDIEIETISLNHPNFAIGYRVCWQGKTVVYCPDTEHYEGYFDENILHLSRNADLLIYDATYTNEEYYDVKSPKIG
LGHSTWEVGVEIARKAGVKQIAMFQHDPGHNDDLLDEVQVALQSIFSNGLVAKEGMTIPIL

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33597; Mature: 33597

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSESSSPISQSEETATPSDSLSTDFVVEFWGVRGSIPTPGSSTVRYGGNTSCVEMRVG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEC
EKRLIFDGGTGLRVLGLELLKEMPVEAHIFFSHTHWDHIQGFPFFVPAFLPINKFHIYGA
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCHHHCCCCCEEEHHHCCCEEEEEEEE
IAPDGTTIKESLSDQMVHPNFPIPLQIMGSQMKFYDFNNGDVIQVDDIEIETISLNHPNF
ECCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEECCEEEEEEEECCCCE
AIGYRVCWQGKTVVYCPDTEHYEGYFDENILHLSRNADLLIYDATYTNEEYYDVKSPKIG
EEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEECCCCCEE
LGHSTWEVGVEIARKAGVKQIAMFQHDPGHNDDLLDEVQVALQSIFSNGLVAKEGMTIPI
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEECCCCEECC
L
C
>Mature Secondary Structure
MLSSESSSPISQSEETATPSDSLSTDFVVEFWGVRGSIPTPGSSTVRYGGNTSCVEMRVG
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEEEEEC
EKRLIFDGGTGLRVLGLELLKEMPVEAHIFFSHTHWDHIQGFPFFVPAFLPINKFHIYGA
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCHHHCCCCCEEEHHHCCCEEEEEEEE
IAPDGTTIKESLSDQMVHPNFPIPLQIMGSQMKFYDFNNGDVIQVDDIEIETISLNHPNF
ECCCCCHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCCCCEEEECCEEEEEEEECCCCE
AIGYRVCWQGKTVVYCPDTEHYEGYFDENILHLSRNADLLIYDATYTNEEYYDVKSPKIG
EEEEEEEECCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEECCCCCEE
LGHSTWEVGVEIARKAGVKQIAMFQHDPGHNDDLLDEVQVALQSIFSNGLVAKEGMTIPI
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEECCCCEECC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA