| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478013
Identifier: 113478013
GI number: 113478013
Start: 7116974
End: 7117789
Strand: Reverse
Name: 113478013
Synonym: Tery_4629
Alternate gene names: NA
Gene position: 7117789-7116974 (Counterclockwise)
Preceding gene: 113478015
Following gene: 113478012
Centisome position: 91.84
GC content: 24.02
Gene sequence:
>816_bases GTGTTATATGATAAACAGCAAAAAAAATCTCTATGTAATAAATATTTTCCAAAATTATTAACAGTACATTTAGAGGATAA GGCTACAGAAATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGACATTTATCTACAGAAATTTATCTACAGAC ATTTATCTACAGACATTTATCTACAGAAATTTATCTACAGACATTTATCTACAGACATTTATCTACAGACATTTATCTAC AGAAATTTATCTACAGACATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGACATTTAT CTACAGAAATTTATCTACAGAAATTTATCTACAGACATTTATCTACAGACATTTATCTATAGAAATTTATCTACAGAAAT TTATCTACAGACATTTATCTACAGACATTTATCTACAGAAATTTATCTACAGACATTTATCTACAGACATTTATCTACAG ACATTTATCTACAGACATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGACATTTATCTATAGAAATTTATCT ACAGACATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGACATTTATCTACAGACATTTATCTATAGAAATTT ATCTACAGACATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGAA ATTTATCTACAGAAATTTATCTACAGACATTTATCTACAGAAATTTATCTACAGAAATTTATCTACAGAAATTTATCTAC AGAAATTTATCTATAG
Upstream 100 bases:
>100_bases AGAGTAAAAAAATATCCTTTTAAAACTTATAAATTGATGGGTTTATTAACAGAATTTTTCCTGGTTTAAGAACAGTCACT TAGCTGCTTTTACACAACAA
Downstream 100 bases:
>100_bases AAATTTATCTACAGAAATTTATCTATAGAAATTTATCTACAGAAATTTATCTACAGAAATTTATTTATAAATCAGGGATA GTTTTTGATGAAATTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLYDKQQKKSLCNKYFPKLLTVHLEDKATEIYLQKFIYRNLSTDIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQTFIY RNLSTDIYLQKFIYRNLSTEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQ TFIYRHLSTEIYLQKFIYRHLSIEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQTFIYRNLSTEIYLQKFIYRNLSTE IYLQKFIYRHLSTEIYLQKFIYRNLSTEIYL
Sequences:
>Translated_271_residues MLYDKQQKKSLCNKYFPKLLTVHLEDKATEIYLQKFIYRNLSTDIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQTFIY RNLSTDIYLQKFIYRNLSTEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQ TFIYRHLSTEIYLQKFIYRHLSIEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQTFIYRNLSTEIYLQKFIYRNLSTE IYLQKFIYRHLSTEIYLQKFIYRNLSTEIYL >Mature_271_residues MLYDKQQKKSLCNKYFPKLLTVHLEDKATEIYLQKFIYRNLSTDIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQTFIY RNLSTDIYLQKFIYRNLSTEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQ TFIYRHLSTEIYLQKFIYRHLSIEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQTFIYRNLSTEIYLQKFIYRNLSTE IYLQKFIYRHLSTEIYLQKFIYRNLSTEIYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34064; Mature: 34064
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYDKQQKKSLCNKYFPKLLTVHLEDKATEIYLQKFIYRNLSTDIYLQKFIYRHLSTDIY CCCCHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHH LQKFIYRHLSTDIYLQTFIYRNLSTDIYLQKFIYRNLSTEIYLQTFIYRNLSTEIYLQTF HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH IYRHLSIEIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQTFIYRHLSTEIYLQKFIYRH HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LSIEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQTFIYRNLSTEIYLQKFIYRNLSTE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH IYLQKFIYRHLSTEIYLQKFIYRNLSTEIYL HHHHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MLYDKQQKKSLCNKYFPKLLTVHLEDKATEIYLQKFIYRNLSTDIYLQKFIYRHLSTDIY CCCCHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHH LQKFIYRHLSTDIYLQTFIYRNLSTDIYLQKFIYRNLSTEIYLQTFIYRNLSTEIYLQTF HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH IYRHLSIEIYLQKFIYRHLSTDIYLQKFIYRHLSTDIYLQTFIYRHLSTEIYLQKFIYRH HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH LSIEIYLQTFIYRNLSTEIYLQTFIYRHLSIEIYLQTFIYRNLSTEIYLQKFIYRNLSTE HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH IYLQKFIYRHLSTEIYLQKFIYRNLSTEIYL HHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA