| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478012
Identifier: 113478012
GI number: 113478012
Start: 7115786
End: 7116241
Strand: Reverse
Name: 113478012
Synonym: Tery_4628
Alternate gene names: NA
Gene position: 7116241-7115786 (Counterclockwise)
Preceding gene: 113478013
Following gene: 113478010
Centisome position: 91.82
GC content: 31.14
Gene sequence:
>456_bases ATGAGTGAAAATTATTTTGATTTTGAGCAAGACTTTGTAGAATCTTTACGGTGTATTCCTATGATAGTACGCTATAAATT AGATACCTGTGGAGTAAAATTAAAATTATCCCACTGGCATCAATTTAATCATTTAATTCGTCAAGAGTTAGTGAATAAAC CTTGCAGTAAATTAGAAGAAATTCAAAGTTATCGAGTATGGCTACATCAGTTAGTAATTGACCATACAGATACTCCTGCT AAAGATTTATCTGTTGAAAAAAATCCGGCTTGGATGGATGAGACTAAAATTCCAGAAATAGTTCAGAAAAAAGCACAAGA AGTAGGTATTAAAATTAAGTTAGATCAATGGAAAAATCTGACGCCACTACAAAGGTTTGTTCTGATTAAACTTAGTCGTT CTAACCATGAAAATAAAAATTTTTTACCTGCTGTTCAGGAATTTCAGCTAATTTGA
Upstream 100 bases:
>100_bases AACATGATATATATGAGTGAAAATTATTTTGATTTTGAGCAAGACTTTGTAGATATTTCTCAACTTTTACAAATAATTAT AGAATAGGAACATGATATAT
Downstream 100 bases:
>100_bases AGGAGTCAAGCACGATGCTTATTTTTAGCACGAATATACGAATAAATCTAATATACTAGACTTGCTCAAAAACTAAGTTG ATTAAATTTCCTATAAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSENYFDFEQDFVESLRCIPMIVRYKLDTCGVKLKLSHWHQFNHLIRQELVNKPCSKLEEIQSYRVWLHQLVIDHTDTPA KDLSVEKNPAWMDETKIPEIVQKKAQEVGIKIKLDQWKNLTPLQRFVLIKLSRSNHENKNFLPAVQEFQLI
Sequences:
>Translated_151_residues MSENYFDFEQDFVESLRCIPMIVRYKLDTCGVKLKLSHWHQFNHLIRQELVNKPCSKLEEIQSYRVWLHQLVIDHTDTPA KDLSVEKNPAWMDETKIPEIVQKKAQEVGIKIKLDQWKNLTPLQRFVLIKLSRSNHENKNFLPAVQEFQLI >Mature_150_residues SENYFDFEQDFVESLRCIPMIVRYKLDTCGVKLKLSHWHQFNHLIRQELVNKPCSKLEEIQSYRVWLHQLVIDHTDTPAK DLSVEKNPAWMDETKIPEIVQKKAQEVGIKIKLDQWKNLTPLQRFVLIKLSRSNHENKNFLPAVQEFQLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18000; Mature: 17869
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENYFDFEQDFVESLRCIPMIVRYKLDTCGVKLKLSHWHQFNHLIRQELVNKPCSKLEE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHH IQSYRVWLHQLVIDHTDTPAKDLSVEKNPAWMDETKIPEIVQKKAQEVGIKIKLDQWKNL HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCC TPLQRFVLIKLSRSNHENKNFLPAVQEFQLI CHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SENYFDFEQDFVESLRCIPMIVRYKLDTCGVKLKLSHWHQFNHLIRQELVNKPCSKLEE CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHH IQSYRVWLHQLVIDHTDTPAKDLSVEKNPAWMDETKIPEIVQKKAQEVGIKIKLDQWKNL HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCC TPLQRFVLIKLSRSNHENKNFLPAVQEFQLI CHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA