| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477983
Identifier: 113477983
GI number: 113477983
Start: 7069101
End: 7069475
Strand: Reverse
Name: 113477983
Synonym: Tery_4595
Alternate gene names: NA
Gene position: 7069475-7069101 (Counterclockwise)
Preceding gene: 113477984
Following gene: 113477981
Centisome position: 91.22
GC content: 34.67
Gene sequence:
>375_bases ATGCTTGGGATAAATTATCCACCTTCATCTGGTTTATTTCCTGATATTCGTCATCAAGCTTTGGAAATCAAGCATCATAC TGGTAAAAGTATTACTGTTGATTTTGGTCGTCATCATCCCGGTTCTGAGGAGATTATTAATGAAACTTGGAATCAAAAAT TACAGATTAAAGTTAATCAGGTACGTTATCTTATTGCTTTAGCACCACCACCAACTTATAAAGTAAGCACACTTATTCTT CTAACTGAGTCTGAAATCATGGATGTTTTCGGAGTTTCTCCAAAAGCAACTATCAAATATCAAATGGGAATATCAAAAAA ATGGTGTGAAGAGCATCAAGGGAAAATGTTGGTAGGACAGTCAATTTGGTTATAG
Upstream 100 bases:
>100_bases TGATAGAAAGACTAATGGAAATAGACTCACCAAGAGATAGTAATGGTAGACTTTTAGAAGTTCGACCAAAAGGGAATTGG TTTGAATTTGAGGTAGCTAA
Downstream 100 bases:
>100_bases TCGTTGGCTTACATTTATAGCGCTGTGCGCAGGCAAAAGCTCATCTGGCAACAGGGGGAATCAATTGACGATAATATAAG ACTTTTAGCTATTTGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MLGINYPPSSGLFPDIRHQALEIKHHTGKSITVDFGRHHPGSEEIINETWNQKLQIKVNQVRYLIALAPPPTYKVSTLIL LTESEIMDVFGVSPKATIKYQMGISKKWCEEHQGKMLVGQSIWL
Sequences:
>Translated_124_residues MLGINYPPSSGLFPDIRHQALEIKHHTGKSITVDFGRHHPGSEEIINETWNQKLQIKVNQVRYLIALAPPPTYKVSTLIL LTESEIMDVFGVSPKATIKYQMGISKKWCEEHQGKMLVGQSIWL >Mature_124_residues MLGINYPPSSGLFPDIRHQALEIKHHTGKSITVDFGRHHPGSEEIINETWNQKLQIKVNQVRYLIALAPPPTYKVSTLIL LTESEIMDVFGVSPKATIKYQMGISKKWCEEHQGKMLVGQSIWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14080; Mature: 14080
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGINYPPSSGLFPDIRHQALEIKHHTGKSITVDFGRHHPGSEEIINETWNQKLQIKVNQ CCCCCCCCCCCCCHHHHHHEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCEEEEEEEE VRYLIALAPPPTYKVSTLILLTESEIMDVFGVSPKATIKYQMGISKKWCEEHQGKMLVGQ EEEEEEECCCCCEEEEEEEEEECCHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCEEECE SIWL EECC >Mature Secondary Structure MLGINYPPSSGLFPDIRHQALEIKHHTGKSITVDFGRHHPGSEEIINETWNQKLQIKVNQ CCCCCCCCCCCCCHHHHHHEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCEEEEEEEE VRYLIALAPPPTYKVSTLILLTESEIMDVFGVSPKATIKYQMGISKKWCEEHQGKMLVGQ EEEEEEECCCCCEEEEEEEEEECCHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCEEECE SIWL EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA