Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477984

Identifier: 113477984

GI number: 113477984

Start: 7069463

End: 7069717

Strand: Reverse

Name: 113477984

Synonym: Tery_4596

Alternate gene names: NA

Gene position: 7069717-7069463 (Counterclockwise)

Preceding gene: 113477985

Following gene: 113477983

Centisome position: 91.22

GC content: 33.33

Gene sequence:

>255_bases
ATGGAAAGAGAAAAACTCTTACAATCAGCTTTGAGAAAAAAGAAATTAATTTACCAAAAGGATTTGGAGGATGGTAATGT
ATTAGCAATTCAACCTGCCTTAGACACTTCTCTTTTCTACACAATAGAAGAAATAGCGATTTTGATAGAAAGACTAATGG
AAATAGACTCACCAAGAGATAGTAATGGTAGACTTTTAGAAGTTCGACCAAAAGGGAATTGGTTTGAATTTGAGGTAGCT
AAATGCTTGGGATAA

Upstream 100 bases:

>100_bases
ATAACGATCAACTCATTTATAACTGGTTTGATTTAGTCGATGATGATATTCAGCAAATAGAACAAATTTTACTTTTAAAC
AAGCCATAAGGTATCACAAT

Downstream 100 bases:

>100_bases
ATTATCCACCTTCATCTGGTTTATTTCCTGATATTCGTCATCAAGCTTTGGAAATCAAGCATCATACTGGTAAAAGTATT
ACTGTTGATTTTGGTCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MEREKLLQSALRKKKLIYQKDLEDGNVLAIQPALDTSLFYTIEEIAILIERLMEIDSPRDSNGRLLEVRPKGNWFEFEVA
KCLG

Sequences:

>Translated_84_residues
MEREKLLQSALRKKKLIYQKDLEDGNVLAIQPALDTSLFYTIEEIAILIERLMEIDSPRDSNGRLLEVRPKGNWFEFEVA
KCLG
>Mature_84_residues
MEREKLLQSALRKKKLIYQKDLEDGNVLAIQPALDTSLFYTIEEIAILIERLMEIDSPRDSNGRLLEVRPKGNWFEFEVA
KCLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9751; Mature: 9751

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREKLLQSALRKKKLIYQKDLEDGNVLAIQPALDTSLFYTIEEIAILIERLMEIDSPRD
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SNGRLLEVRPKGNWFEFEVAKCLG
CCCCEEEECCCCCEEEEHHHHHCC
>Mature Secondary Structure
MEREKLLQSALRKKKLIYQKDLEDGNVLAIQPALDTSLFYTIEEIAILIERLMEIDSPRD
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SNGRLLEVRPKGNWFEFEVAKCLG
CCCCEEEECCCCCEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA