Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477978

Identifier: 113477978

GI number: 113477978

Start: 7060053

End: 7061093

Strand: Reverse

Name: 113477978

Synonym: Tery_4590

Alternate gene names: NA

Gene position: 7061093-7060053 (Counterclockwise)

Preceding gene: 113477980

Following gene: 113477977

Centisome position: 91.11

GC content: 39.29

Gene sequence:

>1041_bases
ATGGAAGAAAAACAACAAACAAACATTATACCACAAACTGCAGAGTCACAAACTAACTCAGTAGAAGAAACAGTGGCACC
ACCTGTAGGACCATCAACTACTACACCACAGGAAACAGTAACACAATTTCGAGTGCCAGAAACTAGTACTACAGTTGAGA
ACACAGAAGTGTCAGAAACTACTACAGTTGAGAACACAGAAGTGTCAGAAACTACTAGAGTTCAGGACACAGTGGTGCAA
CCTGTAGTACTTCCAACTACTACAGCAAAAGAAATAGGACTGCCACAAACTACTGCAGAAGAGGAAATACTAGTACCAAA
ACCTTTAGCTTCAACAAGTATTGCAGAAGAAATAGCAGGAAAAGCAGTTACAGTTCAGGATACAGAAGTGTCAGAAACTA
CTACAGTTGAGAAAACAGAAGTGTCAGAAACTACTAGAGTTCAGGACACAGTGGTGCAGCCTGTAGTACTTCCAACTACT
ACAGCAAAAGAAATAGGACTGCCACAAACTACTGCAGAAGAGGAAATACTAGTACCAAAACCTTTAGCTTCAACAAGTAT
TGCAGAAGAAATAGCAGGAAAAGCAGTTACAGTTCAGGACACAGTGGTGCAACCTGTAGTACTTCCAACTACCACAGCAA
AAGAAATAGGACTGCCACAAACTACTGTAGAAGAGGAAATACTAGTACCAAAACCTTTAGCTTCAACAAGTATTGCAGAA
GAAATAGCAGGAAAAACAGTAGGAAAAGAAGCAGTAACTATTAGCCGTAGAAATAATCAACCCCAGTCAGAACCAATATT
ATTGTATAATCCATCTTTGCGCCTCATACCTCGGCATGAACCAGCAGATGTAATTTCTACTCAACGGGATTCATCTCTTA
TTGATTGGTTGGAAGCATCGGGCAAGATGTTGCCTAGAGACCCTTCTGAATTAGAAAAATATACAGAAGAGGAAGAAGAA
ATATCAGAATTGATAGCTGTAGATGATAATTTTCATGATGATGAAATTTTGGATGAAAATGCAGATGACTCAGGTGACTA
A

Upstream 100 bases:

>100_bases
TTATTGCCAAATCTCTTAAAATCCAAGATACCGGGTCAAACAGAGCAGCTAAATTTAAAATATTGGGATACGTTTACTAA
AATTCCTTAACTGAGGATAT

Downstream 100 bases:

>100_bases
AGATTTTTAATTACTAAAAAGCTATTCACCTATTAGCTAAACTTAACAGTTATGCATTAAATTTTAAGTTTGAAAAAGTG
TGTGTTGAGGAGTGTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MEEKQQTNIIPQTAESQTNSVEETVAPPVGPSTTTPQETVTQFRVPETSTTVENTEVSETTTVENTEVSETTRVQDTVVQ
PVVLPTTTAKEIGLPQTTAEEEILVPKPLASTSIAEEIAGKAVTVQDTEVSETTTVEKTEVSETTRVQDTVVQPVVLPTT
TAKEIGLPQTTAEEEILVPKPLASTSIAEEIAGKAVTVQDTVVQPVVLPTTTAKEIGLPQTTVEEEILVPKPLASTSIAE
EIAGKTVGKEAVTISRRNNQPQSEPILLYNPSLRLIPRHEPADVISTQRDSSLIDWLEASGKMLPRDPSELEKYTEEEEE
ISELIAVDDNFHDDEILDENADDSGD

Sequences:

>Translated_346_residues
MEEKQQTNIIPQTAESQTNSVEETVAPPVGPSTTTPQETVTQFRVPETSTTVENTEVSETTTVENTEVSETTRVQDTVVQ
PVVLPTTTAKEIGLPQTTAEEEILVPKPLASTSIAEEIAGKAVTVQDTEVSETTTVEKTEVSETTRVQDTVVQPVVLPTT
TAKEIGLPQTTAEEEILVPKPLASTSIAEEIAGKAVTVQDTVVQPVVLPTTTAKEIGLPQTTVEEEILVPKPLASTSIAE
EIAGKTVGKEAVTISRRNNQPQSEPILLYNPSLRLIPRHEPADVISTQRDSSLIDWLEASGKMLPRDPSELEKYTEEEEE
ISELIAVDDNFHDDEILDENADDSGD
>Mature_346_residues
MEEKQQTNIIPQTAESQTNSVEETVAPPVGPSTTTPQETVTQFRVPETSTTVENTEVSETTTVENTEVSETTRVQDTVVQ
PVVLPTTTAKEIGLPQTTAEEEILVPKPLASTSIAEEIAGKAVTVQDTEVSETTTVEKTEVSETTRVQDTVVQPVVLPTT
TAKEIGLPQTTAEEEILVPKPLASTSIAEEIAGKAVTVQDTVVQPVVLPTTTAKEIGLPQTTVEEEILVPKPLASTSIAE
EIAGKTVGKEAVTISRRNNQPQSEPILLYNPSLRLIPRHEPADVISTQRDSSLIDWLEASGKMLPRDPSELEKYTEEEEE
ISELIAVDDNFHDDEILDENADDSGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37440; Mature: 37440

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKQQTNIIPQTAESQTNSVEETVAPPVGPSTTTPQETVTQFRVPETSTTVENTEVSET
CCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCC
TTVENTEVSETTRVQDTVVQPVVLPTTTAKEIGLPQTTAEEEILVPKPLASTSIAEEIAG
EECCCCCCCHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCC
KAVTVQDTEVSETTTVEKTEVSETTRVQDTVVQPVVLPTTTAKEIGLPQTTAEEEILVPK
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCCEECCC
PLASTSIAEEIAGKAVTVQDTVVQPVVLPTTTAKEIGLPQTTVEEEILVPKPLASTSIAE
CCCHHHHHHHHCCCEEEEHHHHCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHH
EIAGKTVGKEAVTISRRNNQPQSEPILLYNPSLRLIPRHEPADVISTQRDSSLIDWLEAS
HHHCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCHHHHHCCCCHHHHHHHHHC
GKMLPRDPSELEKYTEEEEEISELIAVDDNFHDDEILDENADDSGD
CCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MEEKQQTNIIPQTAESQTNSVEETVAPPVGPSTTTPQETVTQFRVPETSTTVENTEVSET
CCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCC
TTVENTEVSETTRVQDTVVQPVVLPTTTAKEIGLPQTTAEEEILVPKPLASTSIAEEIAG
EECCCCCCCHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCC
KAVTVQDTEVSETTTVEKTEVSETTRVQDTVVQPVVLPTTTAKEIGLPQTTAEEEILVPK
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCCEECCC
PLASTSIAEEIAGKAVTVQDTVVQPVVLPTTTAKEIGLPQTTVEEEILVPKPLASTSIAE
CCCHHHHHHHHCCCEEEEHHHHCCCEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHH
EIAGKTVGKEAVTISRRNNQPQSEPILLYNPSLRLIPRHEPADVISTQRDSSLIDWLEAS
HHHCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCHHHHHCCCCHHHHHHHHHC
GKMLPRDPSELEKYTEEEEEISELIAVDDNFHDDEILDENADDSGD
CCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA