Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477980

Identifier: 113477980

GI number: 113477980

Start: 7063624

End: 7064181

Strand: Reverse

Name: 113477980

Synonym: Tery_4592

Alternate gene names: NA

Gene position: 7064181-7063624 (Counterclockwise)

Preceding gene: 113477981

Following gene: 113477978

Centisome position: 91.15

GC content: 32.26

Gene sequence:

>558_bases
GTGGGAAAAAATCAGAAAAAAGAAGTCTTTTTTACCGAAGAGGCAGCAGATAAGAAGTTATGGGCAGCTATTGAAAAAGA
GTTCAATGTTCACAAATACCAAACTTTTAGTAATCTCTGTAAGCAAGCTCTATGGCAGTTTTTGTATGGATCTTCGTCTA
CGGAGTTAGCTCAACCTGTATCAAGTTTGCAAAGTCTAGAACAGAAAATTTCTGAGTTGGAAAAAAAATTGACTGCTAGT
GAACAAAATGAATACAATCAGATAAATCAATTAAATGATTTTAAAAAATACTTGAGTCAAATGAATGAACAATTGACTCA
AATGCAATCATCTTTTGACTCTAAACATCTTGAAACTTTGGAGGTTTTCAAGAAAGAATTACCAAAAATTGAAGCTGCTA
TTAATAAAGTAGAGGTATCTATTGTTAAACCTAATCAAGAGTCAGAATTAACCACTACTACAACAAACCAAGTAGAAGAA
GATATACCTGTTGAACAACCAATAACAGAATCTGACCCCTTGTTAAAGCGCTTATCTTCTCTAATAGAAGATTTCTAA

Upstream 100 bases:

>100_bases
AATTCTTATTGTTAGTAGCTAAGAAGTTTTTTAAACAATATTTACGAAAATACTTGATATTGTGATAAGTTTTAAGTTAA
TTAAAGTGTGACCTGATGCT

Downstream 100 bases:

>100_bases
CAAAAAAAATAATTAGTGATTACTTTAGAAAAAATAGTGGGATTAACTAAAAGGCTTTTTTTAGTAGGAAAAATTGACTC
GAACATCAAGAATTAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MGKNQKKEVFFTEEAADKKLWAAIEKEFNVHKYQTFSNLCKQALWQFLYGSSSTELAQPVSSLQSLEQKISELEKKLTAS
EQNEYNQINQLNDFKKYLSQMNEQLTQMQSSFDSKHLETLEVFKKELPKIEAAINKVEVSIVKPNQESELTTTTTNQVEE
DIPVEQPITESDPLLKRLSSLIEDF

Sequences:

>Translated_185_residues
MGKNQKKEVFFTEEAADKKLWAAIEKEFNVHKYQTFSNLCKQALWQFLYGSSSTELAQPVSSLQSLEQKISELEKKLTAS
EQNEYNQINQLNDFKKYLSQMNEQLTQMQSSFDSKHLETLEVFKKELPKIEAAINKVEVSIVKPNQESELTTTTTNQVEE
DIPVEQPITESDPLLKRLSSLIEDF
>Mature_184_residues
GKNQKKEVFFTEEAADKKLWAAIEKEFNVHKYQTFSNLCKQALWQFLYGSSSTELAQPVSSLQSLEQKISELEKKLTASE
QNEYNQINQLNDFKKYLSQMNEQLTQMQSSFDSKHLETLEVFKKELPKIEAAINKVEVSIVKPNQESELTTTTTNQVEED
IPVEQPITESDPLLKRLSSLIEDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21372; Mature: 21241

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNQKKEVFFTEEAADKKLWAAIEKEFNVHKYQTFSNLCKQALWQFLYGSSSTELAQPV
CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SSLQSLEQKISELEKKLTASEQNEYNQINQLNDFKKYLSQMNEQLTQMQSSFDSKHLETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVFKKELPKIEAAINKVEVSIVKPNQESELTTTTTNQVEEDIPVEQPITESDPLLKRLSS
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH
LIEDF
HHHCC
>Mature Secondary Structure 
GKNQKKEVFFTEEAADKKLWAAIEKEFNVHKYQTFSNLCKQALWQFLYGSSSTELAQPV
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
SSLQSLEQKISELEKKLTASEQNEYNQINQLNDFKKYLSQMNEQLTQMQSSFDSKHLETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVFKKELPKIEAAINKVEVSIVKPNQESELTTTTTNQVEEDIPVEQPITESDPLLKRLSS
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH
LIEDF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA