| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is cyaB [H]
Identifier: 113477973
GI number: 113477973
Start: 7051997
End: 7054231
Strand: Reverse
Name: cyaB [H]
Synonym: Tery_4585
Alternate gene names: 113477973
Gene position: 7054231-7051997 (Counterclockwise)
Preceding gene: 113477974
Following gene: 113477972
Centisome position: 91.02
GC content: 36.38
Gene sequence:
>2235_bases ATGTTATGGAGTAAGTTTCTTTGTTTTTTTAATCAATGGTATGGTGTCTGGATAACTGGACCCAGTATAACAGGATTAAT AATCCTACTGCGTTTTTTGGGCTTACTACAGTTTTGGGAGTGGAGCGCTTATGATGGATATATGCGTATGCGGCCTTTGG AAAGTCGAGACAATAGAATTGCTATTGTGGGCATTAATGAAGACGACCTTAGAGCTATTGGGCAACCAATTTTTCCTGAT GCTGTTTATGCGGACTTGCTGAATAAATTGAAAGCAATGAAGCCAAAAGTTATTGGCTTAGATATTTATCGGGATTTACC TGTGGAACCTGGTCATCAGAAATTAGTGGAAGTATTCAAGTCTACCCCCAATATAGTTGGAATTAAAAAGGTAGTGGGAG AAAGACAAGCGGACGTTACAGAAGCAGCACCTGTTTTGGAGGAGAATAAGCGGGCAGGTGCTAATGATTTAAAAGTAGAT TCAGATCAAAAAATTCGACGGGCTTATTTATTTGTGACCCTTCAAAATAGACAAAATATCTTAAGTTTTGCTTCTCATAT TGCTTTGCGGTATTTAAAGAGTTTTGATATTAGCCCAGAGCAAATTGAGGGTGACAAATATCAGTTAGGCAAGGCTGTAT TAGAACCATTTGAAGCTGATGATGGTGGCTATGTACGGGCAGATGCAGGTGGTTTTCTAATTATTTTGAACTACCGTGGT CCTAGTCGCTCCTTCGAGACTGTTTCCATGATGGATATTTTAAAAGATCGAGTACCTCTTGACTGGGGTCGCGATCGAAT TATTTTGATTGGAGCGGTGGGTCAAAGTTTTAATGATTTACATTCTACTCCCTACAGTAGTAGCTTAATTAGAAGTTTAG AACCTATGAGTGGGGTTGAAGTTCATGCTAATCTAATTAGTCAACTGATTAGTTCTGCTATTGATGGTCGTTCCATGATT AAAATTTGGGGGGATACCTACGAATGGATATGGATTTTATTTTGGTCTGGAGTAGGATCTGCAACAACTTGGAAATGGCG AACTGGTGTTAGTGTTAGTTATTTTTCTATTTGGAAAGTAATTACGATTTTTGTGGCTGGTGGAGTTTTATTTGCTAGCA CTTATATTGCTTTTTTGTGGAACTGGTGGTTGCCTGTTGTTCCTGCGTTTTTAGGTATGATTACATCAGCAATTGTGATT ACAGCTTATATTGCTCGTACTGCTCAGAATATTCGCAAAACTTTCGGTCGTTATTTAACCGATGAAGTAGTGGCTACTTT ATTAGAAAGTCCGCAAGGGTTAAAGTTAGGAGGCGAGCGCCGTAAAATTACAATTTTAACTTCCGATCTCAGAGGTTTTA CTGCTACATCAGAACGTTTGCCACCAGAAGAAGTTGTGAAAATTCTTAACTTTTATTTGGGATATATGGCAGATGTAATT ACTGAGTATCAGGGAACTATTGATGAGTTTATGGGAGATGGAATTTTAGTTTTATTTGGTGCTCCTACTTATAGAGGAGA CGATCCGACAAGAGCTGTTGCTTGTGCAATTGCTATGCAGTTGGCAATGGAACCTGTAAATAAACAAATGAAAGAGTGGG GTTTGACACCTTTAGAAATGGGAATTGGGATTAATACAGGAGAAGTTGTTGTTGGTAATATTGGTTCCTGGAAACGGACA AAATATGGTATTGTTGGCAATCAAGTAAATTTAACTTATCGAATTGAATCTTATACTACTGGGGGGCAAATTTTAATTTC TGAAACTACTTTAAATGAAGTAGGATCAATAATTAAAATTAATGGTAAAAAAGAGGTTATGCCAAAAGGAGTAAAAAAGC CAATTACTATTTATGACCTTGGTGGTATTGGTGGTAAATATAATTTATTTTTACCGAAAGAAGAAGAAATTTATTTGCCT CTAAAAGAAGCAATTTCTTTACATTATGTAGTTTTAGATGGCAAAAATGTTAGTGCTTGTGGTCAGAGTGGAAGTTTGGT AAAGTTGTCGAAAAAAGAAGCAGAAATTCAGGTAGTAAATTCAGGGGAAAATATTCCCCATGCTTTGATTAATATTAAGA TTAATTTTTTCTGGGATGGAAAAGAAAGTGAGGATGTTTATGGCAAAGTTTTAGATAAAAAAGCAGAAAATGGTAATTTT TATATTCATTTTACGGCTAAACCACCTGATGTTTCGGCTAAGTTAGAATCTTTGTATAAATCCCTGCAAACTTAA
Upstream 100 bases:
>100_bases AACAGGACTGCCCCTAAATTTTTTCAGGGCAGCCTCAGTTTGATTGTGTAGTAAAGTTAGTAAGATTAACCTGTTTTTTT CTAAAAGGTGCTAATCAAGA
Downstream 100 bases:
>100_bases TGGTTAATTATTACTATGACTCAGTCTGAATTGATGAGTTTTGAATATCAAAATTTATAACAAGTAAACTTACTCAAAGT TAGAGAATTAGGCACGCTAA
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 2; Adenylyl cyclase 2; AC2 [H]
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MLWSKFLCFFNQWYGVWITGPSITGLIILLRFLGLLQFWEWSAYDGYMRMRPLESRDNRIAIVGINEDDLRAIGQPIFPD AVYADLLNKLKAMKPKVIGLDIYRDLPVEPGHQKLVEVFKSTPNIVGIKKVVGERQADVTEAAPVLEENKRAGANDLKVD SDQKIRRAYLFVTLQNRQNILSFASHIALRYLKSFDISPEQIEGDKYQLGKAVLEPFEADDGGYVRADAGGFLIILNYRG PSRSFETVSMMDILKDRVPLDWGRDRIILIGAVGQSFNDLHSTPYSSSLIRSLEPMSGVEVHANLISQLISSAIDGRSMI KIWGDTYEWIWILFWSGVGSATTWKWRTGVSVSYFSIWKVITIFVAGGVLFASTYIAFLWNWWLPVVPAFLGMITSAIVI TAYIARTAQNIRKTFGRYLTDEVVATLLESPQGLKLGGERRKITILTSDLRGFTATSERLPPEEVVKILNFYLGYMADVI TEYQGTIDEFMGDGILVLFGAPTYRGDDPTRAVACAIAMQLAMEPVNKQMKEWGLTPLEMGIGINTGEVVVGNIGSWKRT KYGIVGNQVNLTYRIESYTTGGQILISETTLNEVGSIIKINGKKEVMPKGVKKPITIYDLGGIGGKYNLFLPKEEEIYLP LKEAISLHYVVLDGKNVSACGQSGSLVKLSKKEAEIQVVNSGENIPHALINIKINFFWDGKESEDVYGKVLDKKAENGNF YIHFTAKPPDVSAKLESLYKSLQT
Sequences:
>Translated_744_residues MLWSKFLCFFNQWYGVWITGPSITGLIILLRFLGLLQFWEWSAYDGYMRMRPLESRDNRIAIVGINEDDLRAIGQPIFPD AVYADLLNKLKAMKPKVIGLDIYRDLPVEPGHQKLVEVFKSTPNIVGIKKVVGERQADVTEAAPVLEENKRAGANDLKVD SDQKIRRAYLFVTLQNRQNILSFASHIALRYLKSFDISPEQIEGDKYQLGKAVLEPFEADDGGYVRADAGGFLIILNYRG PSRSFETVSMMDILKDRVPLDWGRDRIILIGAVGQSFNDLHSTPYSSSLIRSLEPMSGVEVHANLISQLISSAIDGRSMI KIWGDTYEWIWILFWSGVGSATTWKWRTGVSVSYFSIWKVITIFVAGGVLFASTYIAFLWNWWLPVVPAFLGMITSAIVI TAYIARTAQNIRKTFGRYLTDEVVATLLESPQGLKLGGERRKITILTSDLRGFTATSERLPPEEVVKILNFYLGYMADVI TEYQGTIDEFMGDGILVLFGAPTYRGDDPTRAVACAIAMQLAMEPVNKQMKEWGLTPLEMGIGINTGEVVVGNIGSWKRT KYGIVGNQVNLTYRIESYTTGGQILISETTLNEVGSIIKINGKKEVMPKGVKKPITIYDLGGIGGKYNLFLPKEEEIYLP LKEAISLHYVVLDGKNVSACGQSGSLVKLSKKEAEIQVVNSGENIPHALINIKINFFWDGKESEDVYGKVLDKKAENGNF YIHFTAKPPDVSAKLESLYKSLQT >Mature_744_residues MLWSKFLCFFNQWYGVWITGPSITGLIILLRFLGLLQFWEWSAYDGYMRMRPLESRDNRIAIVGINEDDLRAIGQPIFPD AVYADLLNKLKAMKPKVIGLDIYRDLPVEPGHQKLVEVFKSTPNIVGIKKVVGERQADVTEAAPVLEENKRAGANDLKVD SDQKIRRAYLFVTLQNRQNILSFASHIALRYLKSFDISPEQIEGDKYQLGKAVLEPFEADDGGYVRADAGGFLIILNYRG PSRSFETVSMMDILKDRVPLDWGRDRIILIGAVGQSFNDLHSTPYSSSLIRSLEPMSGVEVHANLISQLISSAIDGRSMI KIWGDTYEWIWILFWSGVGSATTWKWRTGVSVSYFSIWKVITIFVAGGVLFASTYIAFLWNWWLPVVPAFLGMITSAIVI TAYIARTAQNIRKTFGRYLTDEVVATLLESPQGLKLGGERRKITILTSDLRGFTATSERLPPEEVVKILNFYLGYMADVI TEYQGTIDEFMGDGILVLFGAPTYRGDDPTRAVACAIAMQLAMEPVNKQMKEWGLTPLEMGIGINTGEVVVGNIGSWKRT KYGIVGNQVNLTYRIESYTTGGQILISETTLNEVGSIIKINGKKEVMPKGVKKPITIYDLGGIGGKYNLFLPKEEEIYLP LKEAISLHYVVLDGKNVSACGQSGSLVKLSKKEAEIQVVNSGENIPHALINIKINFFWDGKESEDVYGKVLDKKAENGNF YIHFTAKPPDVSAKLESLYKSLQT
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Homo sapiens, GI148536830, Length=153, Percent_Identity=28.7581699346405, Blast_Score=71, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71989822, Length=181, Percent_Identity=29.8342541436464, Blast_Score=71, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71989805, Length=198, Percent_Identity=29.2929292929293, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24585694, Length=154, Percent_Identity=29.8701298701299, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI161076872, Length=161, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI28574512, Length=161, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00072 Response_reg [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 83199; Mature: 83199
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWSKFLCFFNQWYGVWITGPSITGLIILLRFLGLLQFWEWSAYDGYMRMRPLESRDNRI CCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE AIVGINEDDLRAIGQPIFPDAVYADLLNKLKAMKPKVIGLDIYRDLPVEPGHQKLVEVFK EEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHH STPNIVGIKKVVGERQADVTEAAPVLEENKRAGANDLKVDSDQKIRRAYLFVTLQNRQNI CCCCCEEHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEEEEEEECCCHHH LSFASHIALRYLKSFDISPEQIEGDKYQLGKAVLEPFEADDGGYVRADAGGFLIILNYRG HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECC PSRSFETVSMMDILKDRVPLDWGRDRIILIGAVGQSFNDLHSTPYSSSLIRSLEPMSGVE CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHCCCCCCHH VHANLISQLISSAIDGRSMIKIWGDTYEWIWILFWSGVGSATTWKWRTGVSVSYFSIWKV HHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCEEHHHHHHHH ITIFVAGGVLFASTYIAFLWNWWLPVVPAFLGMITSAIVITAYIARTAQNIRKTFGRYLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVVATLLESPQGLKLGGERRKITILTSDLRGFTATSERLPPEEVVKILNFYLGYMADVI HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TEYQGTIDEFMGDGILVLFGAPTYRGDDPTRAVACAIAMQLAMEPVNKQMKEWGLTPLEM HHHHCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GIGINTGEVVVGNIGSWKRTKYGIVGNQVNLTYRIESYTTGGQILISETTLNEVGSIIKI CCCCCCCCEEEECCCCCCCEEECEECCEEEEEEEEEEECCCCEEEEEECCHHHCCCEEEE NGKKEVMPKGVKKPITIYDLGGIGGKYNLFLPKEEEIYLPLKEAISLHYVVLDGKNVSAC CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEHHHCCEEEEEEEECCCCCCC GQSGSLVKLSKKEAEIQVVNSGENIPHALINIKINFFWDGKESEDVYGKVLDKKAENGNF CCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCE YIHFTAKPPDVSAKLESLYKSLQT EEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLWSKFLCFFNQWYGVWITGPSITGLIILLRFLGLLQFWEWSAYDGYMRMRPLESRDNRI CCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE AIVGINEDDLRAIGQPIFPDAVYADLLNKLKAMKPKVIGLDIYRDLPVEPGHQKLVEVFK EEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHH STPNIVGIKKVVGERQADVTEAAPVLEENKRAGANDLKVDSDQKIRRAYLFVTLQNRQNI CCCCCEEHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEEEEEEECCCHHH LSFASHIALRYLKSFDISPEQIEGDKYQLGKAVLEPFEADDGGYVRADAGGFLIILNYRG HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECC PSRSFETVSMMDILKDRVPLDWGRDRIILIGAVGQSFNDLHSTPYSSSLIRSLEPMSGVE CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHCCCCCCHH VHANLISQLISSAIDGRSMIKIWGDTYEWIWILFWSGVGSATTWKWRTGVSVSYFSIWKV HHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCEEHHHHHHHH ITIFVAGGVLFASTYIAFLWNWWLPVVPAFLGMITSAIVITAYIARTAQNIRKTFGRYLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVVATLLESPQGLKLGGERRKITILTSDLRGFTATSERLPPEEVVKILNFYLGYMADVI HHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH TEYQGTIDEFMGDGILVLFGAPTYRGDDPTRAVACAIAMQLAMEPVNKQMKEWGLTPLEM HHHHCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GIGINTGEVVVGNIGSWKRTKYGIVGNQVNLTYRIESYTTGGQILISETTLNEVGSIIKI CCCCCCCCEEEECCCCCCCEEECEECCEEEEEEEEEEECCCCEEEEEECCHHHCCCEEEE NGKKEVMPKGVKKPITIYDLGGIGGKYNLFLPKEEEIYLPLKEAISLHYVVLDGKNVSAC CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEEEEHHHCCEEEEEEEECCCCCCC GQSGSLVKLSKKEAEIQVVNSGENIPHALINIKINFFWDGKESEDVYGKVLDKKAENGNF CCCCCEEEEECCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCE YIHFTAKPPDVSAKLESLYKSLQT EEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]