Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477972

Identifier: 113477972

GI number: 113477972

Start: 7050474

End: 7051247

Strand: Reverse

Name: 113477972

Synonym: Tery_4584

Alternate gene names: NA

Gene position: 7051247-7050474 (Counterclockwise)

Preceding gene: 113477973

Following gene: 113477970

Centisome position: 90.98

GC content: 39.02

Gene sequence:

>774_bases
ATGACTATCATACATCCAAAAGAAATATATGATTTATTGTTAGAATATGGCAACACTACGACTCCTATCAAAAAAATATT
AATAGGTTTAACCTGGACTTTATGTGAAACTGAAGGTATTGGTTTATGTATGAGCCCGGGTACAACTACGCGCACATTGC
CTTGGTCAGGAACTCTAGTAAATAAACCTGCGAAAGAGTTGGCATCATGGTTGCGGTCTTGGAATAGCTTTGAGGCAACT
GTGGGAATGGCAACTATTAATGCAGAGATAAATCGAAGATCTGCTGTGCGAAAGGAAAAGCTACCTCCGACTCAAGCAGA
ACCCTTATCTCCTTATGGACCTGGGAATTTGGCAGTATTTGAATATTTTTTACCAATGATCCGTGGAAAAAAAGTTGCTA
TTATTGGTAGGTATCCTAAGTTGTCTCGTTATCAGAATGAAATGGAGATGACTGTCATTGAACGGCAACCGGGAGCAGAG
GACTTTCCGGACACTGCATCAGAATATTTATTACCGGAGGCCGAATGGGTCTTTTTAACAGCGACTTCTATTGCTAATAA
AACTTTTCCGCGGTTGGTAGAGTTGGCAAAAAATTCTCAGTTAGTTTTGATGGGTCCAAGTATGCCTTGGTTATTAGAGT
TAAAGGCATTTGGGATTAATTATTTGGCAGGAGTTACTGTTAGTAATGTTGAAGTTTTAAAACAAACTGTTGCTGAAGGT
GGAGGGGTAAGAATTTTTGAAACAGGTGTGCAATATCAAGTGTTAAAGTTGTAG

Upstream 100 bases:

>100_bases
ATTAAACCCTATTAAATATAGTAATTCTACGTAATTTATGGAGGAGTTCATCCAGTTCCTCTACAGAAGACTAACTAATA
ACTTATAACTAATAACTGCA

Downstream 100 bases:

>100_bases
TAAGCTTATAGCTCCTCAAGATATTTTCCATGATCATGTAAAAAATGCTTAAATCAAAGAAAATTAGATTATTATTAATG
ACAAAAAATAGAGTCTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTIIHPKEIYDLLLEYGNTTTPIKKILIGLTWTLCETEGIGLCMSPGTTTRTLPWSGTLVNKPAKELASWLRSWNSFEAT
VGMATINAEINRRSAVRKEKLPPTQAEPLSPYGPGNLAVFEYFLPMIRGKKVAIIGRYPKLSRYQNEMEMTVIERQPGAE
DFPDTASEYLLPEAEWVFLTATSIANKTFPRLVELAKNSQLVLMGPSMPWLLELKAFGINYLAGVTVSNVEVLKQTVAEG
GGVRIFETGVQYQVLKL

Sequences:

>Translated_257_residues
MTIIHPKEIYDLLLEYGNTTTPIKKILIGLTWTLCETEGIGLCMSPGTTTRTLPWSGTLVNKPAKELASWLRSWNSFEAT
VGMATINAEINRRSAVRKEKLPPTQAEPLSPYGPGNLAVFEYFLPMIRGKKVAIIGRYPKLSRYQNEMEMTVIERQPGAE
DFPDTASEYLLPEAEWVFLTATSIANKTFPRLVELAKNSQLVLMGPSMPWLLELKAFGINYLAGVTVSNVEVLKQTVAEG
GGVRIFETGVQYQVLKL
>Mature_256_residues
TIIHPKEIYDLLLEYGNTTTPIKKILIGLTWTLCETEGIGLCMSPGTTTRTLPWSGTLVNKPAKELASWLRSWNSFEATV
GMATINAEINRRSAVRKEKLPPTQAEPLSPYGPGNLAVFEYFLPMIRGKKVAIIGRYPKLSRYQNEMEMTVIERQPGAED
FPDTASEYLLPEAEWVFLTATSIANKTFPRLVELAKNSQLVLMGPSMPWLLELKAFGINYLAGVTVSNVEVLKQTVAEGG
GVRIFETGVQYQVLKL

Specific function: Unknown

COG id: COG2014

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28613; Mature: 28481

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIHPKEIYDLLLEYGNTTTPIKKILIGLTWTLCETEGIGLCMSPGTTTRTLPWSGTLV
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCEEEECCCCCEEECCCCCCCC
NKPAKELASWLRSWNSFEATVGMATINAEINRRSAVRKEKLPPTQAEPLSPYGPGNLAVF
CCCHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
EYFLPMIRGKKVAIIGRYPKLSRYQNEMEMTVIERQPGAEDFPDTASEYLLPEAEWVFLT
HHHHHHHCCCEEEEEECCCCHHHHHCHHEEEEEECCCCCCCCCCCHHHHCCCCCCEEEEE
ATSIANKTFPRLVELAKNSQLVLMGPSMPWLLELKAFGINYLAGVTVSNVEVLKQTVAEG
EHHHHCHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHCCHHHHCCEEHHHHHHHHHHHCC
GGVRIFETGVQYQVLKL
CCEEEEECCCCEEEEEC
>Mature Secondary Structure 
TIIHPKEIYDLLLEYGNTTTPIKKILIGLTWTLCETEGIGLCMSPGTTTRTLPWSGTLV
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCEEEECCCCCEEECCCCCCCC
NKPAKELASWLRSWNSFEATVGMATINAEINRRSAVRKEKLPPTQAEPLSPYGPGNLAVF
CCCHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
EYFLPMIRGKKVAIIGRYPKLSRYQNEMEMTVIERQPGAEDFPDTASEYLLPEAEWVFLT
HHHHHHHCCCEEEEEECCCCHHHHHCHHEEEEEECCCCCCCCCCCHHHHCCCCCCEEEEE
ATSIANKTFPRLVELAKNSQLVLMGPSMPWLLELKAFGINYLAGVTVSNVEVLKQTVAEG
EHHHHCHHHHHHHHHHCCCEEEEECCCCCCEEEHHHHCCHHHHCCEEHHHHHHHHHHHCC
GGVRIFETGVQYQVLKL
CCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA