| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477970
Identifier: 113477970
GI number: 113477970
Start: 7047902
End: 7048252
Strand: Reverse
Name: 113477970
Synonym: Tery_4582
Alternate gene names: NA
Gene position: 7048252-7047902 (Counterclockwise)
Preceding gene: 113477972
Following gene: 113477969
Centisome position: 90.94
GC content: 35.04
Gene sequence:
>351_bases ATGAATAAATCGAAAAAATATCTAATAAATACTATTTGCGCTTTTCTATGCTTATTAGGGTTTAATACAGTTGTCCTAGC TGTTACTTCCAAAACAAAAATTGTGCCAATTCCAAAATATCAAATAGCTCAAACTCCTGTTGGTTATTGTACAATATCAG ACCCAACTGACTCACCTCTGAATGTACGAGAAAGACCAAATGGCAAAGTAATTGGCACCCTGGAAAATGGTGGAGTAGTT GCTCTTGGAGTTACTGATGGTAGTGAGGGTGAAAATTGGACAAGAATTATTCGGCCAATAGAGGGTTATGTATGGGCAAA ATATTTAAGAGATTGTGAATATAAGTATTAG
Upstream 100 bases:
>100_bases GTTGCTCGCTCTCTACTGAGGGCTATTTGAGCAGAATAAATAATGGAAATACTGAGGGTATAATTATATTTTATAATCAA TCTGAACGAGGAAACGAAAT
Downstream 100 bases:
>100_bases TTAGAATAGTAATAAAATACCAAAATATAATATGAAAAACACAATGGTTTGCACTACTGCCAAGCTGGCAATTATTCGAT TCAATTAAGGGCTTGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNKSKKYLINTICAFLCLLGFNTVVLAVTSKTKIVPIPKYQIAQTPVGYCTISDPTDSPLNVRERPNGKVIGTLENGGVV ALGVTDGSEGENWTRIIRPIEGYVWAKYLRDCEYKY
Sequences:
>Translated_116_residues MNKSKKYLINTICAFLCLLGFNTVVLAVTSKTKIVPIPKYQIAQTPVGYCTISDPTDSPLNVRERPNGKVIGTLENGGVV ALGVTDGSEGENWTRIIRPIEGYVWAKYLRDCEYKY >Mature_116_residues MNKSKKYLINTICAFLCLLGFNTVVLAVTSKTKIVPIPKYQIAQTPVGYCTISDPTDSPLNVRERPNGKVIGTLENGGVV ALGVTDGSEGENWTRIIRPIEGYVWAKYLRDCEYKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12888; Mature: 12888
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSKKYLINTICAFLCLLGFNTVVLAVTSKTKIVPIPKYQIAQTPVGYCTISDPTDSPL CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCEECCCCCCEEEECCCCCCCC NVRERPNGKVIGTLENGGVVALGVTDGSEGENWTRIIRPIEGYVWAKYLRDCEYKY CCCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKSKKYLINTICAFLCLLGFNTVVLAVTSKTKIVPIPKYQIAQTPVGYCTISDPTDSPL CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCEECCCCCCEEEECCCCCCCC NVRERPNGKVIGTLENGGVVALGVTDGSEGENWTRIIRPIEGYVWAKYLRDCEYKY CCCCCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA