| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yajO [C]
Identifier: 113477927
GI number: 113477927
Start: 6997007
End: 6998191
Strand: Reverse
Name: yajO [C]
Synonym: Tery_4535
Alternate gene names: 113477927
Gene position: 6998191-6997007 (Counterclockwise)
Preceding gene: 113477928
Following gene: 113477926
Centisome position: 90.3
GC content: 35.7
Gene sequence:
>1185_bases ATGATGCAATATCGACGCTTTGGGCGCACAGAATTATCAATACCAGTGTTTTCCTGTGGCGGAATGAGGTATAAATATAA ATGGCAAGATGTTCCTAAAAATGAAATCCCACTTAATAATCAACAAAACTTAGAAAATACAATCCGTCGCTCTCTAGAAT GTGGGATTAACCACATAGAAACGGCCCGTAATTATGGCACATCTGAAATGCAACTGGGAGAAATTTTACCTCAACTACCA CGGGAAAAATTGATTATCCAAACAAAAATTAGCCCAAGCGTTGACTCCCAAGAATTCAAATCCAAGTTTGATCAGTCTCT CCATTTTTTACAACTAGAATATGTTGACTTGCTGGCCATACATGGGATTAACACGTTAGAACGTCTTGACTATTCTATTA GACCAGGAGGTTGTTTAGATATAGTTAGAAAATTACAAGAGCAGGGAAAAGTCAGGTTTGTTGGTTTCTCTACTCATGGG CCAACTGATGTAATAATTAAAACTATAGAAACCAATCAATTTGACTATGTTAACCTACACTGGTACTACATTAATCAGGA GAATTGGTCCGCAATAGAGGTTGCTAATAAGTTTGATCTGGGAGTATTTATTATTAGTCCTTCTGATAAGGGTGGTAAAT TGTATCAACCGCCACAAAAATTAATAGATTTGTGCTATCCATTAAGCCCAATGGTGTTTAATAATCTATTTTGTTTGAGT CATCCCCAAGTTCATACATTGAGTTTGGGAGCTTCAAAACCAACAGATTTTGATGAGCACTTAAAAACATTGGAATTTTT AGAGAAACCAGATGAGATATTACAACCAATATTAAATAGTCTAGAAAAAGAAGCGATCGCTAAACTAGGAGAAAATTGGT ACCAAACTTGGCATATTGGTTTGCCTACTCCAGAAAATACTCCAGGAAATATTAATATTCCTGTGATTTTATGGTTAAGA AATTTAGCGATCGCCTACGATATGTGGGAATATGCTAAAGTACGCTATAACTTATTGGGCAATGGTAGTCATTGGTTTCC TGGTGCAAATGCTGAACAAGTAGAAAAATATAACTTGAGTAAATTTCTTGTGAATAGTCCTCATGCTGATAAAATTCCAG ATATTCTTCAAGATGCTCATCAATTACTGGTAGGGACTCCAGTAGAACTTTTGTCTAGCACTTAA
Upstream 100 bases:
>100_bases TTATGGTTCTCTAGCTAGAACAAATTTTACAATAAATAATATAGAGGTAAAAGAATAACCTTCTCACCGAAATTAATAGA AATTAATAGAGAGTATTCAG
Downstream 100 bases:
>100_bases TCTATATAATAGCATTTTTTTTATTAGATTAGTTGACTACTTCTAGCTTATTTACAAATAAGGGAAAATTCTCAAATTGA TTAAGTAATATATGAGTTAA
Product: aldo/keto reductase
Products: NA
Alternate protein names: Aldo/Keto Reductase Family Oxidoreductase; Oxidoreductase Aldo/Keto Reductase Family; Oxidoreductase; Aldo/Keto Reductase Family Protein; Oxidoreductase Aldo/Keto Reductase Family Protein; Oxidoreductase Of Aldo/Keto Reductase Family; Aldo/Keto Reductase Ferredoxin Subunit; Oxidoreductase Aldo/Keto Reductase; Aldo/Keto Reductase Family; Twin-Arginine Translocation Pathway Signal Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MMQYRRFGRTELSIPVFSCGGMRYKYKWQDVPKNEIPLNNQQNLENTIRRSLECGINHIETARNYGTSEMQLGEILPQLP REKLIIQTKISPSVDSQEFKSKFDQSLHFLQLEYVDLLAIHGINTLERLDYSIRPGGCLDIVRKLQEQGKVRFVGFSTHG PTDVIIKTIETNQFDYVNLHWYYINQENWSAIEVANKFDLGVFIISPSDKGGKLYQPPQKLIDLCYPLSPMVFNNLFCLS HPQVHTLSLGASKPTDFDEHLKTLEFLEKPDEILQPILNSLEKEAIAKLGENWYQTWHIGLPTPENTPGNINIPVILWLR NLAIAYDMWEYAKVRYNLLGNGSHWFPGANAEQVEKYNLSKFLVNSPHADKIPDILQDAHQLLVGTPVELLSST
Sequences:
>Translated_394_residues MMQYRRFGRTELSIPVFSCGGMRYKYKWQDVPKNEIPLNNQQNLENTIRRSLECGINHIETARNYGTSEMQLGEILPQLP REKLIIQTKISPSVDSQEFKSKFDQSLHFLQLEYVDLLAIHGINTLERLDYSIRPGGCLDIVRKLQEQGKVRFVGFSTHG PTDVIIKTIETNQFDYVNLHWYYINQENWSAIEVANKFDLGVFIISPSDKGGKLYQPPQKLIDLCYPLSPMVFNNLFCLS HPQVHTLSLGASKPTDFDEHLKTLEFLEKPDEILQPILNSLEKEAIAKLGENWYQTWHIGLPTPENTPGNINIPVILWLR NLAIAYDMWEYAKVRYNLLGNGSHWFPGANAEQVEKYNLSKFLVNSPHADKIPDILQDAHQLLVGTPVELLSST >Mature_394_residues MMQYRRFGRTELSIPVFSCGGMRYKYKWQDVPKNEIPLNNQQNLENTIRRSLECGINHIETARNYGTSEMQLGEILPQLP REKLIIQTKISPSVDSQEFKSKFDQSLHFLQLEYVDLLAIHGINTLERLDYSIRPGGCLDIVRKLQEQGKVRFVGFSTHG PTDVIIKTIETNQFDYVNLHWYYINQENWSAIEVANKFDLGVFIISPSDKGGKLYQPPQKLIDLCYPLSPMVFNNLFCLS HPQVHTLSLGASKPTDFDEHLKTLEFLEKPDEILQPILNSLEKEAIAKLGENWYQTWHIGLPTPENTPGNINIPVILWLR NLAIAYDMWEYAKVRYNLLGNGSHWFPGANAEQVEKYNLSKFLVNSPHADKIPDILQDAHQLLVGTPVELLSST
Specific function: Unknown
COG id: COG1453
COG function: function code R; Predicted oxidoreductases of the aldo/keto reductase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24646155, Length=178, Percent_Identity=30.8988764044944, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24646159, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 45255; Mature: 45255
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQYRRFGRTELSIPVFSCGGMRYKYKWQDVPKNEIPLNNQQNLENTIRRSLECGINHIE CCCCHHCCCCEECEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH TARNYGTSEMQLGEILPQLPREKLIIQTKISPSVDSQEFKSKFDQSLHFLQLEYVDLLAI HHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEHHHHHHHHH HGINTLERLDYSIRPGGCLDIVRKLQEQGKVRFVGFSTHGPTDVIIKTIETNQFDYVNLH CCCCHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEE WYYINQENWSAIEVANKFDLGVFIISPSDKGGKLYQPPQKLIDLCYPLSPMVFNNLFCLS EEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCEEEEC HPQVHTLSLGASKPTDFDEHLKTLEFLEKPDEILQPILNSLEKEAIAKLGENWYQTWHIG CCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEC LPTPENTPGNINIPVILWLRNLAIAYDMWEYAKVRYNLLGNGSHWFPGANAEQVEKYNLS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHCHH KFLVNSPHADKIPDILQDAHQLLVGTPVELLSST HHEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure MMQYRRFGRTELSIPVFSCGGMRYKYKWQDVPKNEIPLNNQQNLENTIRRSLECGINHIE CCCCHHCCCCEECEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH TARNYGTSEMQLGEILPQLPREKLIIQTKISPSVDSQEFKSKFDQSLHFLQLEYVDLLAI HHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHEEHHHHHHHHH HGINTLERLDYSIRPGGCLDIVRKLQEQGKVRFVGFSTHGPTDVIIKTIETNQFDYVNLH CCCCHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEE WYYINQENWSAIEVANKFDLGVFIISPSDKGGKLYQPPQKLIDLCYPLSPMVFNNLFCLS EEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCEEEEC HPQVHTLSLGASKPTDFDEHLKTLEFLEKPDEILQPILNSLEKEAIAKLGENWYQTWHIG CCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEC LPTPENTPGNINIPVILWLRNLAIAYDMWEYAKVRYNLLGNGSHWFPGANAEQVEKYNLS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHCHH KFLVNSPHADKIPDILQDAHQLLVGTPVELLSST HHEECCCCCCCHHHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA