Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477926

Identifier: 113477926

GI number: 113477926

Start: 6995363

End: 6996010

Strand: Reverse

Name: 113477926

Synonym: Tery_4534

Alternate gene names: NA

Gene position: 6996010-6995363 (Counterclockwise)

Preceding gene: 113477927

Following gene: 113477925

Centisome position: 90.27

GC content: 30.09

Gene sequence:

>648_bases
ATGTCTTATGAACATATTTTCAATAGTAAAGTAAAATCTTCTGAAGAACTAACCCCTAATGAAGCAATTTTTGCTATTGG
TTTAATGGTTATGGCGGTTGATGGTGATATTGATATGAATGAGGTAGAAATTATTGAGGGTTTCTTAGTTAGAAAAGGAT
TTACTGCTAGAGAAGTAAATGTAGCTAGAGAAAAGGTTTTAAGAATTATTGCTCAAGAGAAAAATGAAGCATTATTTTAT
GCAGCTAAACAGGTACTTCAAAATGAAAAAGAAATAGAAACTGCTTTTGATTTGGCTGTTGAAGTTGCTATGGCAGATAA
TAAGTTAACTGAGGAAGAGGATAGTTTTGTTTTTGGTTTGGCTAAGAGTTTAAAAATTAGTCGAGAAAAGGTTGAGCAAA
AATTTGCAAATGCTACCAAGTATTGCTATAATTCTAGTAGATTAATTGAAAAAATTGAGGAAATTTTATTAAAATTACCT
ATAGGTTCTAAATATGAAGGATATATTAATGCTACTACAGATTTAAAGTCTTTAAATCTTAAAATTCGCACTCCAAATGA
TGAGTTGGTAATTCTTAATATTGATGAAACTGGTAATCACGATCAAATAGAAATGGAATTGGAGTTGGCTCCACCATGGA
TGTTGTAA

Upstream 100 bases:

>100_bases
ATTTTCCAAAAAATGTAGATAATTTATATGGTTAATTTTTTGTTCTTTATTCGTTTTGATTTATCTTTTTATTCACATTT
CAGAGCTTTAAAAAAAATCT

Downstream 100 bases:

>100_bases
GTGGTTGATAGTATTATAACATTTTTTATATCTAAATTCTCTAAAAATTTATCCGGAATTAATTAAGGTAAATTGTTGTT
TTTGGGTAATTAATAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MSYEHIFNSKVKSSEELTPNEAIFAIGLMVMAVDGDIDMNEVEIIEGFLVRKGFTAREVNVAREKVLRIIAQEKNEALFY
AAKQVLQNEKEIETAFDLAVEVAMADNKLTEEEDSFVFGLAKSLKISREKVEQKFANATKYCYNSSRLIEKIEEILLKLP
IGSKYEGYINATTDLKSLNLKIRTPNDELVILNIDETGNHDQIEMELELAPPWML

Sequences:

>Translated_215_residues
MSYEHIFNSKVKSSEELTPNEAIFAIGLMVMAVDGDIDMNEVEIIEGFLVRKGFTAREVNVAREKVLRIIAQEKNEALFY
AAKQVLQNEKEIETAFDLAVEVAMADNKLTEEEDSFVFGLAKSLKISREKVEQKFANATKYCYNSSRLIEKIEEILLKLP
IGSKYEGYINATTDLKSLNLKIRTPNDELVILNIDETGNHDQIEMELELAPPWML
>Mature_214_residues
SYEHIFNSKVKSSEELTPNEAIFAIGLMVMAVDGDIDMNEVEIIEGFLVRKGFTAREVNVAREKVLRIIAQEKNEALFYA
AKQVLQNEKEIETAFDLAVEVAMADNKLTEEEDSFVFGLAKSLKISREKVEQKFANATKYCYNSSRLIEKIEEILLKLPI
GSKYEGYINATTDLKSLNLKIRTPNDELVILNIDETGNHDQIEMELELAPPWML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24454; Mature: 24323

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEHIFNSKVKSSEELTPNEAIFAIGLMVMAVDGDIDMNEVEIIEGFLVRKGFTAREVN
CCCHHHHCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH
VAREKVLRIIAQEKNEALFYAAKQVLQNEKEIETAFDLAVEVAMADNKLTEEEDSFVFGL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHH
AKSLKISREKVEQKFANATKYCYNSSRLIEKIEEILLKLPIGSKYEGYINATTDLKSLNL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEE
KIRTPNDELVILNIDETGNHDQIEMELELAPPWML
EEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
SYEHIFNSKVKSSEELTPNEAIFAIGLMVMAVDGDIDMNEVEIIEGFLVRKGFTAREVN
CCHHHHCCCCCCCCCCCCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHH
VAREKVLRIIAQEKNEALFYAAKQVLQNEKEIETAFDLAVEVAMADNKLTEEEDSFVFGL
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHH
AKSLKISREKVEQKFANATKYCYNSSRLIEKIEEILLKLPIGSKYEGYINATTDLKSLNL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEE
KIRTPNDELVILNIDETGNHDQIEMELELAPPWML
EEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA