| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is gltI [H]
Identifier: 113477911
GI number: 113477911
Start: 6965009
End: 6965869
Strand: Reverse
Name: gltI [H]
Synonym: Tery_4514
Alternate gene names: 113477911
Gene position: 6965869-6965009 (Counterclockwise)
Preceding gene: 113477912
Following gene: 113477910
Centisome position: 89.88
GC content: 36.12
Gene sequence:
>861_bases ATGAACAAGAAACTAAAAATTATTATTGCTTCATCCCTAGCATTCTTGGCGGCTATTTTTCCTCAAAAAATTAGTCATGC ACAAACACAAGAAACAATCATTAGAAGAGAGTTAATAGTAGTAGGAGTTAGGGGAGATTCCCCTTGGTTTGGCTTCAGAA ATGATGGAAAATGGACGGGATATTGTATAGATATTGCCTATGCTTTAGCGGACCGCCTTAGTGCCAACCAGCTCGATCCT ATCAGGGTAAGATTAGTTACATCAACGACCCAAAGTCGTTGGGATTTGGTAACAAGTGGTAGGGTAGATTTAGAATGCGG TCCTAATTCTATTAGTGCTGAGCGTGAAGCCAAGCATGGTATTAATTTTTCTTCACCTTTTTTTATCACAGCAACACAAA TTTTAGCTAAAAAAGGTAGACAAGAAGAAGATGTGAAAGTGGGTAATGCCACAGTTGGTGTAGTTAGGAATACTACTAAT GAAAGCGATCTAAAGAGTGCTTATCCATTAGAAAAAATTGATAATAAATATTTAAGTAGAGAAGAAGGTGTTCAAGCTGT GATGGATGGTGAAGTTAGTGGTTTTGCTAGTGATGGAACTCTTTTGTTAGGTTCAGCGGAGATGATGAACTTGGATATAG AAAATGATTATACTTTTATTACTATTAATCAAGAAAATGGCCGTCCTTTTTGTGCTGGTTATGGCTTCATACTTCCAGGA GGGGAAGATAATTCTAGTTGGCAAAGGTATATTAATGACTTTCTTGCTCATAATAAAAAAGCCCAAAGAATTAGAAAAAA ATGGTTGGGTAATTTAAGCGAGAATAGTCAAAGAATTTATGATGCTTGTACTCAGAAATAG
Upstream 100 bases:
>100_bases TTTTTGTTGAGACCCAGCCGGAACATGATGATCGAAATGACCCTATTTGGGTATTTGTGACTCGAAGCACTTTGAGATTT TAATCTTCAAACTAACAATT
Downstream 100 bases:
>100_bases GGAGTAGATACCTTGTATGAAAGTCCCTAAGCTAGTGGGGGAGGCTTGAGCTAGCTCAAAATTTAGAAGTCTAAGAGTTA TCAATGGGCTAGTTCAAGTC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRNDGKWTGYCIDIAYALADRLSANQLDP IRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKHGINFSSPFFITATQILAKKGRQEEDVKVGNATVGVVRNTTN ESDLKSAYPLEKIDNKYLSREEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFITINQENGRPFCAGYGFILPG GEDNSSWQRYINDFLAHNKKAQRIRKKWLGNLSENSQRIYDACTQK
Sequences:
>Translated_286_residues MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRNDGKWTGYCIDIAYALADRLSANQLDP IRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKHGINFSSPFFITATQILAKKGRQEEDVKVGNATVGVVRNTTN ESDLKSAYPLEKIDNKYLSREEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFITINQENGRPFCAGYGFILPG GEDNSSWQRYINDFLAHNKKAQRIRKKWLGNLSENSQRIYDACTQK >Mature_286_residues MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRNDGKWTGYCIDIAYALADRLSANQLDP IRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKHGINFSSPFFITATQILAKKGRQEEDVKVGNATVGVVRNTTN ESDLKSAYPLEKIDNKYLSREEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFITINQENGRPFCAGYGFILPG GEDNSSWQRYINDFLAHNKKAQRIRKKWLGNLSENSQRIYDACTQK
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=253, Percent_Identity=25.6916996047431, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 31939; Mature: 31939
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRNDGKWTG CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEE YCIDIAYALADRLSANQLDPIRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKHG EHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHHCC INFSSPFFITATQILAKKGRQEEDVKVGNATVGVVRNTTNESDLKSAYPLEKIDNKYLSR CCCCCCCEEHHHHHHHHCCCCCCCEEECCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHH EEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFITINQENGRPFCAGYGFILPG HHCCCEEECCCCCCCCCCCEEEEECCEEEEEEECCCEEEEEEECCCCCEEEEECCEEECC GEDNSSWQRYINDFLAHNKKAQRIRKKWLGNLSENSQRIYDACTQK CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MNKKLKIIIASSLAFLAAIFPQKISHAQTQETIIRRELIVVGVRGDSPWFGFRNDGKWTG CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEE YCIDIAYALADRLSANQLDPIRVRLVTSTTQSRWDLVTSGRVDLECGPNSISAEREAKHG EHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHHCC INFSSPFFITATQILAKKGRQEEDVKVGNATVGVVRNTTNESDLKSAYPLEKIDNKYLSR CCCCCCCEEHHHHHHHHCCCCCCCEEECCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHH EEGVQAVMDGEVSGFASDGTLLLGSAEMMNLDIENDYTFITINQENGRPFCAGYGFILPG HHCCCEEECCCCCCCCCCCEEEEECCEEEEEEECCCEEEEEEECCCCCEEEEECCEEECC GEDNSSWQRYINDFLAHNKKAQRIRKKWLGNLSENSQRIYDACTQK CCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]