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The map label for this gene is 113477912

Identifier: 113477912

GI number: 113477912

Start: 6965887

End: 6967656

Strand: Reverse

Name: 113477912

Synonym: Tery_4515

Alternate gene names: NA

Gene position: 6967656-6965887 (Counterclockwise)

Preceding gene: 113477914

Following gene: 113477911

Centisome position: 89.9

GC content: 38.7

Gene sequence:

>1770_bases
ATGAGACTGAAGTTTTGCAACATTGTAATTTTTCCCCTAGTTCTAGGAATGGGATGGGTTTTATCTATTGCCCACAGCAG
TAAAGCCGAAAAACAAGTATCAAGTCAGGACATTGAGCAAGCTGCCCATATTTTAGAAAAAATGCAGGAGTACAACCCTC
TCAACCAACCTCCGCCAAAATCTCAACCGCTTGCCAACTGGAAGGAAGAAAGCACAACCATAGTTAAAGAGACAAATGAG
GGTATTTTAGGACAAATAGAACAATATAATCAACTCGACCAACATACAGAAATATCTGCCCCTTTAGAAAAAGTTAACTC
TGTCAATCAACTTAGTGATATTTTACCTGTAGATTGGGCTTATAGTGCTCTCCAAGGATTAGCAGAACGTTATGATTGTT
TATTAACCTCTCCAAATGCTACATTTAGTGGTAATAGAGCTATCAGTCGTTACGAATTTGCAGTAAATCTTAACGAATGT
TTACAAGTTATTCAAAATCTGATTGAAGAATTCGATGAAACTTATATTACTCAAGAAGACTTAGCCAAAAGCCAAAGATT
ACAGGAAGATTTTGCTATTGAAATCGCCGATATTAAATCTCGCCTCAATGGCTTGGAAACTCGAACAGACATTCTGGAAG
CTAATCAGTTTTCTACCACAACTTTGCTAAAAGGGGAAGTAGTGCTGGCTCTATATGATGCTTTTGGTAATGATGGTGAA
GAGGATGCTACAGCAAGCGCCGATGATAGCCAAATAGGCTTTGGTCATAACTTAACGTTGAACTTTGATACTAGTTTTAC
AGGTAGAGACTTCCTCAGAACTAGGTTAAGAGCAGGAGACCTACCTGGAGTAAATACAGATACTGCCATGACCAATTTAA
ACAATGGCTCTCCACCTAATGATATAACGCGATTAACAGAAATATACTATATTTTTCCCCTCAACAAGGAAATGAGTATT
TATATAGGAGCTGCTGGACTTGACTTCGATTTGATTGCTCCTGCACTTAATCCTAAACTAATTAGTGGTAATACAGGAAG
TCTGGCCTTGTTCCCTGCTTATAGTCCCACTATCTATATTCAAGTAGGGGGTGCTGGTTTGGGTTATAGTTATCAAATTA
ACGATAATTTGAGGTTAGATGTTGCTTATCTGGGGGGTGCTCCTGGGGGTGGTACGGGAAAAGTTAACGATCCAAGAGAA
GGAGGTGGAATTTTTAACGGTACAAATAGTGCTTATGCTCAGTTAACAGTTTCACCAAATTTAGATTTGGATTTTTCTTT
TGCTTATGTAAGAGCATATTATACGGCAGATTTAGTTAATGTAGCAGGTTTTACAGGTAGTAGAAATGCTCAAAAACCTT
TTGGCAAAGTGCCAACTTCAGCCGACCATTTTGGGTTTCAAAGTAGCTATCGCTGGGCACCATTTACGATTTCTGGTTGG
GTTGGCTATAGCAATGCTGAAGCTGAAGCAGGCGATCGCGAAGGAGATGAAGCAGATATTTGGCATTGGGCAGTGACGGT
AGCGATAAATGACTTAGTGTTTGAAAATGGAAGTTTAGGTCTTTCAGTTGGTCAACAGCCAAAATTGACTGATATTGACA
ATGGTGAGGATGACCCAGATACTTCTATACAATTTCAACTTTTCTACAATTATCGCATTTCAAATAATATAGATATAACG
TCTGGTTTTTTTGTTGAGACCCAGCCGGAACATGATGATCGAAATGACCCTATTTGGGTATTTGTGACTCGAAGCACTTT
GAGATTTTAA

Upstream 100 bases:

>100_bases
TGAGATGTAAACATGAGAAGAAAAGTATTTAGTAGTGTCATTTGTGTTTTAAAATCATAATACTTAATTGTAGTGCCAAT
AAAATTATCAAACTTAAAAT

Downstream 100 bases:

>100_bases
TCTTCAAACTAACAATTATGAACAAGAAACTAAAAATTATTATTGCTTCATCCCTAGCATTCTTGGCGGCTATTTTTCCT
CAAAAAATTAGTCATGCACA

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MRLKFCNIVIFPLVLGMGWVLSIAHSSKAEKQVSSQDIEQAAHILEKMQEYNPLNQPPPKSQPLANWKEESTTIVKETNE
GILGQIEQYNQLDQHTEISAPLEKVNSVNQLSDILPVDWAYSALQGLAERYDCLLTSPNATFSGNRAISRYEFAVNLNEC
LQVIQNLIEEFDETYITQEDLAKSQRLQEDFAIEIADIKSRLNGLETRTDILEANQFSTTTLLKGEVVLALYDAFGNDGE
EDATASADDSQIGFGHNLTLNFDTSFTGRDFLRTRLRAGDLPGVNTDTAMTNLNNGSPPNDITRLTEIYYIFPLNKEMSI
YIGAAGLDFDLIAPALNPKLISGNTGSLALFPAYSPTIYIQVGGAGLGYSYQINDNLRLDVAYLGGAPGGGTGKVNDPRE
GGGIFNGTNSAYAQLTVSPNLDLDFSFAYVRAYYTADLVNVAGFTGSRNAQKPFGKVPTSADHFGFQSSYRWAPFTISGW
VGYSNAEAEAGDREGDEADIWHWAVTVAINDLVFENGSLGLSVGQQPKLTDIDNGEDDPDTSIQFQLFYNYRISNNIDIT
SGFFVETQPEHDDRNDPIWVFVTRSTLRF

Sequences:

>Translated_589_residues
MRLKFCNIVIFPLVLGMGWVLSIAHSSKAEKQVSSQDIEQAAHILEKMQEYNPLNQPPPKSQPLANWKEESTTIVKETNE
GILGQIEQYNQLDQHTEISAPLEKVNSVNQLSDILPVDWAYSALQGLAERYDCLLTSPNATFSGNRAISRYEFAVNLNEC
LQVIQNLIEEFDETYITQEDLAKSQRLQEDFAIEIADIKSRLNGLETRTDILEANQFSTTTLLKGEVVLALYDAFGNDGE
EDATASADDSQIGFGHNLTLNFDTSFTGRDFLRTRLRAGDLPGVNTDTAMTNLNNGSPPNDITRLTEIYYIFPLNKEMSI
YIGAAGLDFDLIAPALNPKLISGNTGSLALFPAYSPTIYIQVGGAGLGYSYQINDNLRLDVAYLGGAPGGGTGKVNDPRE
GGGIFNGTNSAYAQLTVSPNLDLDFSFAYVRAYYTADLVNVAGFTGSRNAQKPFGKVPTSADHFGFQSSYRWAPFTISGW
VGYSNAEAEAGDREGDEADIWHWAVTVAINDLVFENGSLGLSVGQQPKLTDIDNGEDDPDTSIQFQLFYNYRISNNIDIT
SGFFVETQPEHDDRNDPIWVFVTRSTLRF
>Mature_589_residues
MRLKFCNIVIFPLVLGMGWVLSIAHSSKAEKQVSSQDIEQAAHILEKMQEYNPLNQPPPKSQPLANWKEESTTIVKETNE
GILGQIEQYNQLDQHTEISAPLEKVNSVNQLSDILPVDWAYSALQGLAERYDCLLTSPNATFSGNRAISRYEFAVNLNEC
LQVIQNLIEEFDETYITQEDLAKSQRLQEDFAIEIADIKSRLNGLETRTDILEANQFSTTTLLKGEVVLALYDAFGNDGE
EDATASADDSQIGFGHNLTLNFDTSFTGRDFLRTRLRAGDLPGVNTDTAMTNLNNGSPPNDITRLTEIYYIFPLNKEMSI
YIGAAGLDFDLIAPALNPKLISGNTGSLALFPAYSPTIYIQVGGAGLGYSYQINDNLRLDVAYLGGAPGGGTGKVNDPRE
GGGIFNGTNSAYAQLTVSPNLDLDFSFAYVRAYYTADLVNVAGFTGSRNAQKPFGKVPTSADHFGFQSSYRWAPFTISGW
VGYSNAEAEAGDREGDEADIWHWAVTVAINDLVFENGSLGLSVGQQPKLTDIDNGEDDPDTSIQFQLFYNYRISNNIDIT
SGFFVETQPEHDDRNDPIWVFVTRSTLRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 64990; Mature: 64990

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKFCNIVIFPLVLGMGWVLSIAHSSKAEKQVSSQDIEQAAHILEKMQEYNPLNQPPPK
CCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SQPLANWKEESTTIVKETNEGILGQIEQYNQLDQHTEISAPLEKVNSVNQLSDILPVDWA
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
YSALQGLAERYDCLLTSPNATFSGNRAISRYEFAVNLNECLQVIQNLIEEFDETYITQED
HHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCHHH
LAKSQRLQEDFAIEIADIKSRLNGLETRTDILEANQFSTTTLLKGEVVLALYDAFGNDGE
HHHHHHCCHHHEEEHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCEEEEEEEHHCCCCC
EDATASADDSQIGFGHNLTLNFDTSFTGRDFLRTRLRAGDLPGVNTDTAMTNLNNGSPPN
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCH
DITRLTEIYYIFPLNKEMSIYIGAAGLDFDLIAPALNPKLISGNTGSLALFPAYSPTIYI
HHHHEEEEEEEEECCCCEEEEEEECCCCHHHCCCCCCCEEEECCCCCEEEEECCCCEEEE
QVGGAGLGYSYQINDNLRLDVAYLGGAPGGGTGKVNDPREGGGIFNGTNSAYAQLTVSPN
EECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCC
LDLDFSFAYVRAYYTADLVNVAGFTGSRNAQKPFGKVPTSADHFGFQSSYRWAPFTISGW
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECE
VGYSNAEAEAGDREGDEADIWHWAVTVAINDLVFENGSLGLSVGQQPKLTDIDNGEDDPD
ECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCC
TSIQFQLFYNYRISNNIDITSGFFVETQPEHDDRNDPIWVFVTRSTLRF
CCEEEEEEEEEEECCCEEECCCEEEEECCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MRLKFCNIVIFPLVLGMGWVLSIAHSSKAEKQVSSQDIEQAAHILEKMQEYNPLNQPPPK
CCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SQPLANWKEESTTIVKETNEGILGQIEQYNQLDQHTEISAPLEKVNSVNQLSDILPVDWA
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHH
YSALQGLAERYDCLLTSPNATFSGNRAISRYEFAVNLNECLQVIQNLIEEFDETYITQED
HHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCHHH
LAKSQRLQEDFAIEIADIKSRLNGLETRTDILEANQFSTTTLLKGEVVLALYDAFGNDGE
HHHHHHCCHHHEEEHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCEEEEEEEHHCCCCC
EDATASADDSQIGFGHNLTLNFDTSFTGRDFLRTRLRAGDLPGVNTDTAMTNLNNGSPPN
CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCH
DITRLTEIYYIFPLNKEMSIYIGAAGLDFDLIAPALNPKLISGNTGSLALFPAYSPTIYI
HHHHEEEEEEEEECCCCEEEEEEECCCCHHHCCCCCCCEEEECCCCCEEEEECCCCEEEE
QVGGAGLGYSYQINDNLRLDVAYLGGAPGGGTGKVNDPREGGGIFNGTNSAYAQLTVSPN
EECCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCC
LDLDFSFAYVRAYYTADLVNVAGFTGSRNAQKPFGKVPTSADHFGFQSSYRWAPFTISGW
CCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECE
VGYSNAEAEAGDREGDEADIWHWAVTVAINDLVFENGSLGLSVGQQPKLTDIDNGEDDPD
ECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCC
TSIQFQLFYNYRISNNIDITSGFFVETQPEHDDRNDPIWVFVTRSTLRF
CCEEEEEEEEEEECCCEEECCCEEEEECCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 2507869 [H]