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The map label for this gene is yrrO [H]

Identifier: 113477897

GI number: 113477897

Start: 6944946

End: 6946148

Strand: Reverse

Name: yrrO [H]

Synonym: Tery_4499

Alternate gene names: 113477897

Gene position: 6946148-6944946 (Counterclockwise)

Preceding gene: 113477900

Following gene: 113477894

Centisome position: 89.63

GC content: 44.22

Gene sequence:

>1203_bases
ATGTGGAAACCAGAATTGTTAGCTCCTGCTAAAAATCTTGAACGTCTAAAGGTTGCGGTTACTTATGGTGCTGATGCTGT
TTATGTGGGGGGGCAAAAATACGGTCTGCGGACGCGAGCGGATAATTTTTCTGACTATGACTTGGAATATGGGGTAAATT
TTGCTCACGAAAATGATGCTAAGGTCTACCTGACTCTGAATGCTTTTCTCCATGATGATGATTTTGAGGGTTTGGCAGAA
TATTGTCGGTTTCTAGAATATATTGGTATTGATGGGGTTATTGTTTCTGACTTGGGGGTTTTGCGAGTGGTGAAACGTAG
TTCTGATATCGATATTCATCTCTCGACTCAAGCATCTTGTCTGAATTCTTATGCTGGTCAAATGTGGAAACAGTTTGGTG
TGAAGCGTCTGATAGTGGGGCGAGAAGTTAGTGTGGTAGAGGGTGGGGCAATTAGAGCGCAGACTGGCGTTGATGTGGAA
ATGTTTGTGCATGGTGCTATGTGTATGGCTTTTTCGGGTAATTGTACAATCTCTAATTTTACTGCTGGTAGAGACTCTAA
CCGTGGTGGTTGTATTCAGTCTTGTCGTTTTCCCTATCAGTTGGGGGAAAAAACTGATGATCGCCCGGTGACTTTTATGT
CTTCTAAAGATTTATGGGGTATTCACCAGGTAGGAGGGTTTTTTGAGCATCAAATTTGTTCTCTGAAAATAGAGGGGCGG
ATGAAGTCGTCGTTTTATGTGGCGGTGACTTGTCGGGCTTATCGGCAAGCGATCGATGCTTATGGGGAGGGGAGGTTAAC
TCCAGAAATGTTGAGTCAAATTGTGGCTGAGTTAGAGTCTATTCCTCACCGTGACTATGATTCTGCTTCGTTGGAAAGTC
CTGCAGGGAGTGATTCTGTATATAAGCAGTTGGAAAGTAGTAGGGGTACTCATGAGTATTTAGGAATTGTAATGGAGACG
ACGTCAGAAAGTATTGTTTTACAGTTGGTTGAGTCTGTGGCGCTGGGAGATGAAATTGAGATTATTCCGGTGCATGGGGA
GGTTATGCGCTGGCGGTTGAGTCAGCTTGTTTCTGTGGTTGGCGATCGCTTGGAGAAAATGCGAGCGGGGAATGTGGTTT
GTATTCCTAAGGCTGTGGCGCCTGGGGTTTTAAATAATGTTGAAAAATTAAATGTGGTCAGGGTGGCAGGTGTTAGGTGT
TAG

Upstream 100 bases:

>100_bases
TGTATTTTTGAATTATAGCGTTAATTCTGATTCTTTAAAGCATGATTTAGGGAGGGAGCTAAAATATATAAGTTCATGAC
TATGAATATATATAAATAAT

Downstream 100 bases:

>100_bases
GTTTTGGGTTTTAGATGTGAATAATATTATGTTTATGACCTAGATAAAAATGAATTAAGTGGCTTTTTACTCTCGGATTT
ACTAAGGTTTAAAACAGAAA

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MWKPELLAPAKNLERLKVAVTYGADAVYVGGQKYGLRTRADNFSDYDLEYGVNFAHENDAKVYLTLNAFLHDDDFEGLAE
YCRFLEYIGIDGVIVSDLGVLRVVKRSSDIDIHLSTQASCLNSYAGQMWKQFGVKRLIVGREVSVVEGGAIRAQTGVDVE
MFVHGAMCMAFSGNCTISNFTAGRDSNRGGCIQSCRFPYQLGEKTDDRPVTFMSSKDLWGIHQVGGFFEHQICSLKIEGR
MKSSFYVAVTCRAYRQAIDAYGEGRLTPEMLSQIVAELESIPHRDYDSASLESPAGSDSVYKQLESSRGTHEYLGIVMET
TSESIVLQLVESVALGDEIEIIPVHGEVMRWRLSQLVSVVGDRLEKMRAGNVVCIPKAVAPGVLNNVEKLNVVRVAGVRC

Sequences:

>Translated_400_residues
MWKPELLAPAKNLERLKVAVTYGADAVYVGGQKYGLRTRADNFSDYDLEYGVNFAHENDAKVYLTLNAFLHDDDFEGLAE
YCRFLEYIGIDGVIVSDLGVLRVVKRSSDIDIHLSTQASCLNSYAGQMWKQFGVKRLIVGREVSVVEGGAIRAQTGVDVE
MFVHGAMCMAFSGNCTISNFTAGRDSNRGGCIQSCRFPYQLGEKTDDRPVTFMSSKDLWGIHQVGGFFEHQICSLKIEGR
MKSSFYVAVTCRAYRQAIDAYGEGRLTPEMLSQIVAELESIPHRDYDSASLESPAGSDSVYKQLESSRGTHEYLGIVMET
TSESIVLQLVESVALGDEIEIIPVHGEVMRWRLSQLVSVVGDRLEKMRAGNVVCIPKAVAPGVLNNVEKLNVVRVAGVRC
>Mature_400_residues
MWKPELLAPAKNLERLKVAVTYGADAVYVGGQKYGLRTRADNFSDYDLEYGVNFAHENDAKVYLTLNAFLHDDDFEGLAE
YCRFLEYIGIDGVIVSDLGVLRVVKRSSDIDIHLSTQASCLNSYAGQMWKQFGVKRLIVGREVSVVEGGAIRAQTGVDVE
MFVHGAMCMAFSGNCTISNFTAGRDSNRGGCIQSCRFPYQLGEKTDDRPVTFMSSKDLWGIHQVGGFFEHQICSLKIEGR
MKSSFYVAVTCRAYRQAIDAYGEGRLTPEMLSQIVAELESIPHRDYDSASLESPAGSDSVYKQLESSRGTHEYLGIVMET
TSESIVLQLVESVALGDEIEIIPVHGEVMRWRLSQLVSVVGDRLEKMRAGNVVCIPKAVAPGVLNNVEKLNVVRVAGVRC

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=403, Percent_Identity=31.5136476426799, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI87081910, Length=265, Percent_Identity=37.3584905660377, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1789548, Length=292, Percent_Identity=29.1095890410959, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 44213; Mature: 44213

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKPELLAPAKNLERLKVAVTYGADAVYVGGQKYGLRTRADNFSDYDLEYGVNFAHENDA
CCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCCC
KVYLTLNAFLHDDDFEGLAEYCRFLEYIGIDGVIVSDLGVLRVVKRSSDIDIHLSTQASC
EEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCHHHH
LNSYAGQMWKQFGVKRLIVGREVSVVEGGAIRAQTGVDVEMFVHGAMCMAFSGNCTISNF
HHHHHHHHHHHHCCCEEEECCEEEEEECCCEEECCCCCHHHHHHCEEEEEECCCEEEEEE
TAGRDSNRGGCIQSCRFPYQLGEKTDDRPVTFMSSKDLWGIHQVGGFFEHQICSLKIEGR
ECCCCCCCCCCHHHCCCCHHHCCCCCCCCEEEECCCCCCCHHHHCCHHHCCEEEEEECCE
MKSSFYVAVTCRAYRQAIDAYGEGRLTPEMLSQIVAELESIPHRDYDSASLESPAGSDSV
ECCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
YKQLESSRGTHEYLGIVMETTSESIVLQLVESVALGDEIEIIPVHGEVMRWRLSQLVSVV
HHHHHHCCCCCHHEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
GDRLEKMRAGNVVCIPKAVAPGVLNNVEKLNVVRVAGVRC
HHHHHHHHCCCEEEECHHHCCHHHCCHHHEEEEEECCCCC
>Mature Secondary Structure
MWKPELLAPAKNLERLKVAVTYGADAVYVGGQKYGLRTRADNFSDYDLEYGVNFAHENDA
CCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCCC
KVYLTLNAFLHDDDFEGLAEYCRFLEYIGIDGVIVSDLGVLRVVKRSSDIDIHLSTQASC
EEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCHHHH
LNSYAGQMWKQFGVKRLIVGREVSVVEGGAIRAQTGVDVEMFVHGAMCMAFSGNCTISNF
HHHHHHHHHHHHCCCEEEECCEEEEEECCCEEECCCCCHHHHHHCEEEEEECCCEEEEEE
TAGRDSNRGGCIQSCRFPYQLGEKTDDRPVTFMSSKDLWGIHQVGGFFEHQICSLKIEGR
ECCCCCCCCCCHHHCCCCHHHCCCCCCCCEEEECCCCCCCHHHHCCHHHCCEEEEEECCE
MKSSFYVAVTCRAYRQAIDAYGEGRLTPEMLSQIVAELESIPHRDYDSASLESPAGSDSV
ECCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
YKQLESSRGTHEYLGIVMETTSESIVLQLVESVALGDEIEIIPVHGEVMRWRLSQLVSVV
HHHHHHCCCCCHHEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHH
GDRLEKMRAGNVVCIPKAVAPGVLNNVEKLNVVRVAGVRC
HHHHHHHHCCCEEEECHHHCCHHHCCHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]