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The map label for this gene is ybgC [C]

Identifier: 113477900

GI number: 113477900

Start: 6948444

End: 6948929

Strand: Reverse

Name: ybgC [C]

Synonym: Tery_4502

Alternate gene names: 113477900

Gene position: 6948929-6948444 (Counterclockwise)

Preceding gene: 113477902

Following gene: 113477897

Centisome position: 89.66

GC content: 38.07

Gene sequence:

>486_bases
GTGGCCTCATCAGAACAATTTCAACCTCAATTACCTACAAGTGCAATTGAAAATCAACCTACTGAAAAGCCGGAAGTCTG
GTTTGAATATGTAGTTCGGGTTTATCCACACCATACTGACTATGGTGGTATTGTTTGGCATGGAGTTTATCTTTCTTGGA
TGGAGGAGGCGAGAGTCGAAAGTTTACGTTCTATTGGTATTGAATTTGCTGAGTTAGTTAACCTCGGTTGTGATTTGCCA
GTAGTCGATCTTTCGATAAAATATCATCAACCTATAAAGCTGGGTATGGTAGTTGTGGTCAAGACCTGCATGAGAAATAC
TCAAGGGGTTAGGTTAGAATGGGATTACAAAATTCAATCTTTGGATAATCAAGAATTATATACGACTGCCAAAGTGACTT
TAGTAACTGTTGACCGGGAAAAAGGTAAAATTATGCGTCGTTTACCTCCATCAATAGAAGCAATTTTTACAAGGCTTTCA
AAATAA

Upstream 100 bases:

>100_bases
AAGTTAAGTGAACCAAATAATAATAGTCATTTAAACTAGCATATATTCCTAATTGCAATGGTAAATTTGAGAAATGTAGA
GTTTTAGAAATTTTTGTAAA

Downstream 100 bases:

>100_bases
TTTAGGGTTCCTTGAGTTATTAATCAAATTCAAGTATTTTGAAATTTTACTTGAGTCATATACATATTAATTTTTAGGTT
TTATTTTGAGCTTTACTGTG

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MASSEQFQPQLPTSAIENQPTEKPEVWFEYVVRVYPHHTDYGGIVWHGVYLSWMEEARVESLRSIGIEFAELVNLGCDLP
VVDLSIKYHQPIKLGMVVVVKTCMRNTQGVRLEWDYKIQSLDNQELYTTAKVTLVTVDREKGKIMRRLPPSIEAIFTRLS
K

Sequences:

>Translated_161_residues
MASSEQFQPQLPTSAIENQPTEKPEVWFEYVVRVYPHHTDYGGIVWHGVYLSWMEEARVESLRSIGIEFAELVNLGCDLP
VVDLSIKYHQPIKLGMVVVVKTCMRNTQGVRLEWDYKIQSLDNQELYTTAKVTLVTVDREKGKIMRRLPPSIEAIFTRLS
K
>Mature_160_residues
ASSEQFQPQLPTSAIENQPTEKPEVWFEYVVRVYPHHTDYGGIVWHGVYLSWMEEARVESLRSIGIEFAELVNLGCDLPV
VDLSIKYHQPIKLGMVVVVKTCMRNTQGVRLEWDYKIQSLDNQELYTTAKVTLVTVDREKGKIMRRLPPSIEAIFTRLSK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=129, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18583; Mature: 18451

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSEQFQPQLPTSAIENQPTEKPEVWFEYVVRVYPHHTDYGGIVWHGVYLSWMEEARVE
CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SLRSIGIEFAELVNLGCDLPVVDLSIKYHQPIKLGMVVVVKTCMRNTQGVRLEWDYKIQS
HHHHHCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
LDNQELYTTAKVTLVTVDREKGKIMRRLPPSIEAIFTRLSK
CCCCCEEEEEEEEEEEEECCCCHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
ASSEQFQPQLPTSAIENQPTEKPEVWFEYVVRVYPHHTDYGGIVWHGVYLSWMEEARVE
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SLRSIGIEFAELVNLGCDLPVVDLSIKYHQPIKLGMVVVVKTCMRNTQGVRLEWDYKIQS
HHHHHCHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
LDNQELYTTAKVTLVTVDREKGKIMRRLPPSIEAIFTRLSK
CCCCCEEEEEEEEEEEEECCCCHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]