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The map label for this gene is cbaA [H]

Identifier: 113477750

GI number: 113477750

Start: 6699593

End: 6700990

Strand: Reverse

Name: cbaA [H]

Synonym: Tery_4346

Alternate gene names: 113477750

Gene position: 6700990-6699593 (Counterclockwise)

Preceding gene: 113477755

Following gene: 113477748

Centisome position: 86.46

GC content: 33.69

Gene sequence:

>1398_bases
ATGATTGCTAATACCATCAAAAAATCCGACAATATTCCTGTAAGTGCAGGTGGAACAGACCCAGAATATTTTGATTGGCA
AGAAGTTTGGTATCCAATTTATTATATAGAAGACTTAGAGAAAAATAAACCTACAACATTTACATTATTAGAACAAGATC
TTGTGATTTGGTGGGAAGAAAAAAACAATCAATGGCGGGTATTTGAAGATCAATGTCCCCATCGTTTAGCACCCCTTTCT
CAAGGTAGAATTAATGAGGCTGGATGCTTAGAATGCCCCTATCATGGTTGGGCATTTTCAGGGGGAGGAAATTGTGAAAT
TATTCCTCAACAAATTGCAGGAGGAAAGGCAGAAAAATCATCAAGAGCAAAAGTTAAATCTCTACCTACAAAAGTTTGTC
AAGGTCTTTTATTTGTCTATGCAGGAAAAATCGAAAATGCTGCTCAAACACCTATTCCTAAAGTTGATGTTTTAGATGAA
AATTCTAATGAATGGATTTGTTTAAATACTTTTCGAGATGTACCTTATGATGGTTTAACATTAATGGAAAATGTCTTAGA
TGCTAGTCATATTCCTTATACTCATCATCGTACTGTGGGAAACCGCGCTAATGTTGCTCCTGTAGAATTAGAAGTTTTAG
AATCTGGAAAATGGGGTTTTAAAGGGGTCTGGGAAGAAGGTCCAAGAAAAGGAACTTTAGGAAGACAAGAGACTACTTTT
ATTGCTCCTGGAATGATGTGGCATGACCTTACTTCTAAACAATTTGGTCGTACATTAACAGTTGTATATGCAACACCTAT
TCGTAAAGGAGAATGTCGTTTATTTGCCCGTTTCCCTTTTAAGTTTTCTTCTCCCTTACCGAAATTTTTTATTCAGTTAA
GCCCCCGTTGGTATTCTCATATTGGGCAAAATGGAGTATTGGAAGATGACCAAATATTTTTACATTATCAAGAACGATAT
TTAGAAGCAAAGGGTGGTAGTGCTAATTTTTCTAAGGCTTTTTATTTACCTACAAAAGCAGATTTATTTGTATTTGAATT
GCGTTCTTGGGTGAATAAATATAATGCTCAATTATTTCCTAATGCAACTTTAAGTTCTGCTCTGAACTCAGAAATATTGT
TAGATAGGTATCATTCTCATACTAAAAAATGTAGTAGTTGTCGCAGAGCTTTAAAAAATTTACAACGAATAAAGGTTGGA
GTCGTGCTTGTGACTTCATTTATCTGGGCAAGTATTTTTTTTATGCTGTTAATATTAGATGATTTTAATATGACTTTGAT
GACTTTTTTGATTTTAAGTTTGCCTGTTGGAGTTGTTTTTTGGTTACTGTTAAGTAAATTAGAAAAACAGTTTTATCAAG
GACGAGAAATACCTCCAAGAAATTTATTAAATAATTGA

Upstream 100 bases:

>100_bases
TTAATAATACGAAGACCCATCAAAATACTAAACTAAGAATTTTCTTCCCACATAAAGCTATATTGTATTAAGTAGCTTAA
GTAAAATAACTGATATTCTA

Downstream 100 bases:

>100_bases
ATTTTTCTCTAGAGAACTGCTTCTAAATTACTTCTACATGGTTTGCTGAATAAATATAGAGTTGTGATTTATTTGTCAAA
TATTTGATTAAGGTAGCAAA

Product: pheophorbide a oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MIANTIKKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWRVFEDQCPHRLAPLS
QGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVKSLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDE
NSNEWICLNTFRDVPYDGLTLMENVLDASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGPRKGTLGRQETTF
IAPGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKFFIQLSPRWYSHIGQNGVLEDDQIFLHYQERY
LEAKGGSANFSKAFYLPTKADLFVFELRSWVNKYNAQLFPNATLSSALNSEILLDRYHSHTKKCSSCRRALKNLQRIKVG
VVLVTSFIWASIFFMLLILDDFNMTLMTFLILSLPVGVVFWLLLSKLEKQFYQGREIPPRNLLNN

Sequences:

>Translated_465_residues
MIANTIKKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWRVFEDQCPHRLAPLS
QGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVKSLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDE
NSNEWICLNTFRDVPYDGLTLMENVLDASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGPRKGTLGRQETTF
IAPGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKFFIQLSPRWYSHIGQNGVLEDDQIFLHYQERY
LEAKGGSANFSKAFYLPTKADLFVFELRSWVNKYNAQLFPNATLSSALNSEILLDRYHSHTKKCSSCRRALKNLQRIKVG
VVLVTSFIWASIFFMLLILDDFNMTLMTFLILSLPVGVVFWLLLSKLEKQFYQGREIPPRNLLNN
>Mature_465_residues
MIANTIKKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWRVFEDQCPHRLAPLS
QGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVKSLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDE
NSNEWICLNTFRDVPYDGLTLMENVLDASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGPRKGTLGRQETTF
IAPGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKFFIQLSPRWYSHIGQNGVLEDDQIFLHYQERY
LEAKGGSANFSKAFYLPTKADLFVFELRSWVNKYNAQLFPNATLSSALNSEILLDRYHSHTKKCSSCRRALKNLQRIKVG
VVLVTSFIWASIFFMLLILDDFNMTLMTFLILSLPVGVVFWLLLSKLEKQFYQGREIPPRNLLNN

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 53286; Mature: 53286

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANTIKKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEE
CCCCCCCCCCCCEEECCCCCCCCCCHHHHHEEEEEEEECCCCCCCEEEEEECCEEEEEEC
KNNQWRVFEDQCPHRLAPLSQGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKS
CCCCEEEEHHCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCEEEHHHHCCCCCCCH
SRAKVKSLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDENSNEWICLNTFRDVPYDGLT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCHH
LMENVLDASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGPRKGTLGRQETTF
HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
IAPGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKFFIQLSPRWYSH
EECCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHEEECCHHHHH
IGQNGVLEDDQIFLHYQERYLEAKGGSANFSKAFYLPTKADLFVFELRSWVNKYNAQLFP
CCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCEECC
NATLSSALNSEILLDRYHSHTKKCSSCRRALKNLQRIKVGVVLVTSFIWASIFFMLLILD
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DFNMTLMTFLILSLPVGVVFWLLLSKLEKQFYQGREIPPRNLLNN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MIANTIKKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEE
CCCCCCCCCCCCEEECCCCCCCCCCHHHHHEEEEEEEECCCCCCCEEEEEECCEEEEEEC
KNNQWRVFEDQCPHRLAPLSQGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKS
CCCCEEEEHHCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCEEEHHHHCCCCCCCH
SRAKVKSLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDENSNEWICLNTFRDVPYDGLT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCHH
LMENVLDASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGPRKGTLGRQETTF
HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
IAPGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKFFIQLSPRWYSH
EECCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHEEECCHHHHH
IGQNGVLEDDQIFLHYQERYLEAKGGSANFSKAFYLPTKADLFVFELRSWVNKYNAQLFP
CCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCEECC
NATLSSALNSEILLDRYHSHTKKCSSCRRALKNLQRIKVGVVLVTSFIWASIFFMLLILD
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DFNMTLMTFLILSLPVGVVFWLLLSKLEKQFYQGREIPPRNLLNN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704279 [H]