Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477748

Identifier: 113477748

GI number: 113477748

Start: 6697857

End: 6698822

Strand: Reverse

Name: 113477748

Synonym: Tery_4344

Alternate gene names: NA

Gene position: 6698822-6697857 (Counterclockwise)

Preceding gene: 113477750

Following gene: 113477746

Centisome position: 86.44

GC content: 38.1

Gene sequence:

>966_bases
ATGGATATGTCAAAATTACTGAAGAAACTTTCAGTTATCGTCGCTGGAACAAGTTTTTTTTCCATAACAGGAACAACTGT
AGCTGAGGCAATTTCTATAGCCCCTAGGAATAATGAACAAGATTTAGCATCGAAGATTCTCGGAAGTGGAATTACACTAA
TGCCAGGTTCTGTTAATTATATTGGTGCTACTGGTGCTTCAGGATTTTTCCAAAATGGAATTAAATCAGGAATAGGTATT
GATGAAGGTATTATTCTAAGTACAGGTTTAGCAGAACATGCAGTAGGTCCGAATAACTTAAGTAAACGAAGTACTGTGAA
TGGGCTCTCTGGCGATCCTGATTTGGGTGCCTTGATGCCTGGGGTTTCAACTAGTGATGCTACTATTCTAGAGTTTCAGT
TTAAAACAGCAGGAGGCAATATTTTCTTTAATTATGTGTTTGCCTCGGAAGAATATAACCAATATGTTGGCAGTGCCTTC
AACGATGTCTTCGGCTTCTTTTTAAACGGAAAAAATATTGCTCTCATTCCTAATACATCTACTCCAGTTGCAATTAGCAC
AGTAAACGGAGGCAACCCTTTTGGAACTAATGGGAGTAACCCTGAGTTTTTCAATAATAATGATGGAGAAAGGTTCAATA
TATCATTTGATGGGTTCACTGATGTCTTTACTGCCCAAGCGTTTGGACTAGATCCTGGTGTTCATAATATCAAACTAGCG
ATAGCTGATGGAGGAGATTCTTCTCTTGATTCTGCCGTGTTTATTCAGGGAAAGACTTTTTCTACTCAAACAACAAAGTA
TGTTCCTGAGCCTTCCGCTGATCCTGCCGTGTTTATTCCGGAAAATACTTTTTCTGATCAACCAACAAATAAACTAACAA
AGCATGTTCCTGAGCCTTCCGCAATGATCGGTTTATTAGTAACTAGTTTGGGCAGTTTCTTTTTCAAAAAAGTCTACAAA
GTTTAA

Upstream 100 bases:

>100_bases
CTTATAAACTCAAATGATACCTTAATTCACAAACGCCCAAATTTTGATGTTGTTTGATATAATAATATGGTATACTTTAT
TTAATTGGAGTAATAAGGTA

Downstream 100 bases:

>100_bases
TAACTAATTTCTTCCACTGAGGATATTAGATAGCGATCGAGCCACAATGATCGGTTTATGAGTAACTAGTTTGGGCAGTT
TCTTTTTCAAGAAAGTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MDMSKLLKKLSVIVAGTSFFSITGTTVAEAISIAPRNNEQDLASKILGSGITLMPGSVNYIGATGASGFFQNGIKSGIGI
DEGIILSTGLAEHAVGPNNLSKRSTVNGLSGDPDLGALMPGVSTSDATILEFQFKTAGGNIFFNYVFASEEYNQYVGSAF
NDVFGFFLNGKNIALIPNTSTPVAISTVNGGNPFGTNGSNPEFFNNNDGERFNISFDGFTDVFTAQAFGLDPGVHNIKLA
IADGGDSSLDSAVFIQGKTFSTQTTKYVPEPSADPAVFIPENTFSDQPTNKLTKHVPEPSAMIGLLVTSLGSFFFKKVYK
V

Sequences:

>Translated_321_residues
MDMSKLLKKLSVIVAGTSFFSITGTTVAEAISIAPRNNEQDLASKILGSGITLMPGSVNYIGATGASGFFQNGIKSGIGI
DEGIILSTGLAEHAVGPNNLSKRSTVNGLSGDPDLGALMPGVSTSDATILEFQFKTAGGNIFFNYVFASEEYNQYVGSAF
NDVFGFFLNGKNIALIPNTSTPVAISTVNGGNPFGTNGSNPEFFNNNDGERFNISFDGFTDVFTAQAFGLDPGVHNIKLA
IADGGDSSLDSAVFIQGKTFSTQTTKYVPEPSADPAVFIPENTFSDQPTNKLTKHVPEPSAMIGLLVTSLGSFFFKKVYK
V
>Mature_321_residues
MDMSKLLKKLSVIVAGTSFFSITGTTVAEAISIAPRNNEQDLASKILGSGITLMPGSVNYIGATGASGFFQNGIKSGIGI
DEGIILSTGLAEHAVGPNNLSKRSTVNGLSGDPDLGALMPGVSTSDATILEFQFKTAGGNIFFNYVFASEEYNQYVGSAF
NDVFGFFLNGKNIALIPNTSTPVAISTVNGGNPFGTNGSNPEFFNNNDGERFNISFDGFTDVFTAQAFGLDPGVHNIKLA
IADGGDSSLDSAVFIQGKTFSTQTTKYVPEPSADPAVFIPENTFSDQPTNKLTKHVPEPSAMIGLLVTSLGSFFFKKVYK
V

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33785; Mature: 33785

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSKLLKKLSVIVAGTSFFSITGTTVAEAISIAPRNNEQDLASKILGSGITLMPGSVNY
CCHHHHHHHHHEEEECCEEEEECCHHHHHHHEECCCCCHHHHHHHHHHCCCEECCCCCEE
IGATGASGFFQNGIKSGIGIDEGIILSTGLAEHAVGPNNLSKRSTVNGLSGDPDLGALMP
EECCCCCHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCC
GVSTSDATILEFQFKTAGGNIFFNYVFASEEYNQYVGSAFNDVFGFFLNGKNIALIPNTS
CCCCCCCEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHEEECCCEEEEECCCC
TPVAISTVNGGNPFGTNGSNPEFFNNNDGERFNISFDGFTDVFTAQAFGLDPGVHNIKLA
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEE
IADGGDSSLDSAVFIQGKTFSTQTTKYVPEPSADPAVFIPENTFSDQPTNKLTKHVPEPS
EECCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHCCCHH
AMIGLLVTSLGSFFFKKVYKV
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMSKLLKKLSVIVAGTSFFSITGTTVAEAISIAPRNNEQDLASKILGSGITLMPGSVNY
CCHHHHHHHHHEEEECCEEEEECCHHHHHHHEECCCCCHHHHHHHHHHCCCEECCCCCEE
IGATGASGFFQNGIKSGIGIDEGIILSTGLAEHAVGPNNLSKRSTVNGLSGDPDLGALMP
EECCCCCHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHCC
GVSTSDATILEFQFKTAGGNIFFNYVFASEEYNQYVGSAFNDVFGFFLNGKNIALIPNTS
CCCCCCCEEEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHEEECCCEEEEECCCC
TPVAISTVNGGNPFGTNGSNPEFFNNNDGERFNISFDGFTDVFTAQAFGLDPGVHNIKLA
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEEE
IADGGDSSLDSAVFIQGKTFSTQTTKYVPEPSADPAVFIPENTFSDQPTNKLTKHVPEPS
EECCCCCCCCCEEEEECCCCCCCCCEECCCCCCCCEEEECCCCCCCCCHHHHHHHCCCHH
AMIGLLVTSLGSFFFKKVYKV
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA