| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ilvC
Identifier: 113477739
GI number: 113477739
Start: 6682448
End: 6683443
Strand: Reverse
Name: ilvC
Synonym: Tery_4335
Alternate gene names: 113477739
Gene position: 6683443-6682448 (Counterclockwise)
Preceding gene: 113477740
Following gene: 113477737
Centisome position: 86.24
GC content: 42.87
Gene sequence:
>996_bases ATGGCCAGAATGTACTATGACTCTGATGCTAACCTGGACATCTTAAATGACAAAACGATCGCTATCATTGGATATGGTTC TCAAGGTCATGCTCACGCCCTTAATCTCAAAGATAGTGGCTCAAAGGTAATTGTAGGCCTCTATTCAGGTAGTAAATCTG CTACCAAAGCCAAAGACGCAGGTCTAGATGTTTACCCAGTAGATGAAGCTGCGGAAAAAGCAGACCTAATCATGATTCTA TTACCAGACGAAGTGCAGAAAACCGTCTATAAAAATCAAATTGAACCCCATCTCAAAGAAGGAAAAATTTTAGCTTTTGC CCACGGTTTCAATATTCACTTTGGCCAAATTATTCCCCCAGAAAATGTGGATGTAGTAATGGTAGCACCAAAAGGCCCTG GACATTTAGTCAGGCGTACTTATGAACAAGGAGAAGGAGTCCCCTGTCTATTTGCCATTTTCCAAGATGCTTCTGGTCAA GGACGCGATCGCGCTATGGCTTATGCTAAAGGTATTGGTGGTACTCGCGCTGGTATCCTAGAAACTACCTTCCGGGAAGA AACTGAAACAGACCTCTTTGGTGAACAAGTTGTTCTCTGTGGTGGCCTCAGTGCATTAATTAAAGCTGGATTTGAAACCT TAGTAAAAGCTGGATATCAACCAGAACTAGCATACTTTGAGTGTCTCCATGAAGTTAAACTTATAGTCGATCTAGTTGTC GAAGGTGGTCTAGCTAATATGCGTGACAGTATCTCCAATACTGCTGAGTTTGGCGACTACACTCGCGGGCCTCGCATCGT TACAGATGAAACTCGCGCTCAGATGCAGAAAATTTTAAGTGAAATTCAATCTGGTCAGTTTGCCAGGGAATTTGTCATGG AAAACCAAACCGGTAAACCTGTATTTACTGCCATGCGCCGCCAAGAAGCAGAACACTCTATTGAAGAAGTTGGGAAAGAC TTACGCGCTATGTTTAGCTGGTTAAAGAAACGCTAA
Upstream 100 bases:
>100_bases AGTCTTGGCTATATTGTCGATATTTAAATGCTTAAAGTTATATTTGATATGATAAAAATCTCTCATATATGATAACAGTT GCTAATAGGAGAAAAAAATA
Downstream 100 bases:
>100_bases AAATTTTCTAGGAAAAGGGAAGAGGTAATTCCAGTCATTAGTTATCAGTACCTCTTACTTCCAACTGGAAACTTGAGATC TAACTTTCTGGTCAAGATAC
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MARMYYDSDANLDILNDKTIAIIGYGSQGHAHALNLKDSGSKVIVGLYSGSKSATKAKDAGLDVYPVDEAAEKADLIMIL LPDEVQKTVYKNQIEPHLKEGKILAFAHGFNIHFGQIIPPENVDVVMVAPKGPGHLVRRTYEQGEGVPCLFAIFQDASGQ GRDRAMAYAKGIGGTRAGILETTFREETETDLFGEQVVLCGGLSALIKAGFETLVKAGYQPELAYFECLHEVKLIVDLVV EGGLANMRDSISNTAEFGDYTRGPRIVTDETRAQMQKILSEIQSGQFAREFVMENQTGKPVFTAMRRQEAEHSIEEVGKD LRAMFSWLKKR
Sequences:
>Translated_331_residues MARMYYDSDANLDILNDKTIAIIGYGSQGHAHALNLKDSGSKVIVGLYSGSKSATKAKDAGLDVYPVDEAAEKADLIMIL LPDEVQKTVYKNQIEPHLKEGKILAFAHGFNIHFGQIIPPENVDVVMVAPKGPGHLVRRTYEQGEGVPCLFAIFQDASGQ GRDRAMAYAKGIGGTRAGILETTFREETETDLFGEQVVLCGGLSALIKAGFETLVKAGYQPELAYFECLHEVKLIVDLVV EGGLANMRDSISNTAEFGDYTRGPRIVTDETRAQMQKILSEIQSGQFAREFVMENQTGKPVFTAMRRQEAEHSIEEVGKD LRAMFSWLKKR >Mature_330_residues ARMYYDSDANLDILNDKTIAIIGYGSQGHAHALNLKDSGSKVIVGLYSGSKSATKAKDAGLDVYPVDEAAEKADLIMILL PDEVQKTVYKNQIEPHLKEGKILAFAHGFNIHFGQIIPPENVDVVMVAPKGPGHLVRRTYEQGEGVPCLFAIFQDASGQG RDRAMAYAKGIGGTRAGILETTFREETETDLFGEQVVLCGGLSALIKAGFETLVKAGYQPELAYFECLHEVKLIVDLVVE GGLANMRDSISNTAEFGDYTRGPRIVTDETRAQMQKILSEIQSGQFAREFVMENQTGKPVFTAMRRQEAEHSIEEVGKDL RAMFSWLKKR
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=285, Percent_Identity=37.1929824561403, Blast_Score=148, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6323387, Length=325, Percent_Identity=30.7692307692308, Blast_Score=142, Evalue=8e-35,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_TRIEI (Q10WP7)
Other databases:
- EMBL: CP000393 - RefSeq: YP_723800.1 - ProteinModelPortal: Q10WP7 - SMR: Q10WP7 - STRING: Q10WP7 - GeneID: 4245987 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_4335 - NMPDR: fig|203124.1.peg.3099 - eggNOG: COG0059 - HOGENOM: HBG286525 - OMA: MAYAKGI - PhylomeDB: Q10WP7 - ProtClustDB: PRK05479 - BioCyc: TERY203124:TERY_4335-MONOMER - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 36437; Mature: 36306
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMYYDSDANLDILNDKTIAIIGYGSQGHAHALNLKDSGSKVIVGLYSGSKSATKAKDA CCEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHC GLDVYPVDEAAEKADLIMILLPDEVQKTVYKNQIEPHLKEGKILAFAHGFNIHFGQIIPP CCEEEECCHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCC ENVDVVMVAPKGPGHLVRRTYEQGEGVPCLFAIFQDASGQGRDRAMAYAKGIGGTRAGIL CCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHH ETTFREETETDLFGEQVVLCGGLSALIKAGFETLVKAGYQPELAYFECLHEVKLIVDLVV HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLANMRDSISNTAEFGDYTRGPRIVTDETRAQMQKILSEIQSGQFAREFVMENQTGKP CCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCH VFTAMRRQEAEHSIEEVGKDLRAMFSWLKKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARMYYDSDANLDILNDKTIAIIGYGSQGHAHALNLKDSGSKVIVGLYSGSKSATKAKDA CEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHC GLDVYPVDEAAEKADLIMILLPDEVQKTVYKNQIEPHLKEGKILAFAHGFNIHFGQIIPP CCEEEECCHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEECCCCCC ENVDVVMVAPKGPGHLVRRTYEQGEGVPCLFAIFQDASGQGRDRAMAYAKGIGGTRAGIL CCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHH ETTFREETETDLFGEQVVLCGGLSALIKAGFETLVKAGYQPELAYFECLHEVKLIVDLVV HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLANMRDSISNTAEFGDYTRGPRIVTDETRAQMQKILSEIQSGQFAREFVMENQTGKP CCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCH VFTAMRRQEAEHSIEEVGKDLRAMFSWLKKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA