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The map label for this gene is soj [H]

Identifier: 113477643

GI number: 113477643

Start: 6530078

End: 6530878

Strand: Reverse

Name: soj [H]

Synonym: Tery_4230

Alternate gene names: 113477643

Gene position: 6530878-6530078 (Counterclockwise)

Preceding gene: 113477644

Following gene: 113477642

Centisome position: 84.27

GC content: 30.09

Gene sequence:

>801_bases
ATGGCTAAAACTATTGCTTTCGCTAACCTCAAAGGAGGCACAGGAAAAACTACTATTTGCATAAATATTGCTGGATGTTT
AACTATAATTAATCCAAAAAGTCGAATATTAGTAGTAGATTTTGATCCTCAAGCGAATGCAACTTCTGGGTTAGGAATTG
ATGAAAATAATTTAGAAAACTCTATTTATGATGTAATTTTAAATCAATTTAATCAATATCAAGGAGTTCCTATTACTCAG
GCAATTTTAGCAACACAAATAGAAAATCTTCATTTAGTTCCCTCTGAGTTAAATTTAGCAACAGCTTCTATTTTAATGCA
GCAAGGTAAAGATAAAGTCGGAACTTTAAATCGAATATTAACCCTAATTAAATCCTATTATAATTATATTTTAATTGATG
TGCCCTCAGACACAGGCTTATTTATGCTCAATAGTTTACGAGCAGCAGATGAGGCTGTTATTCCTATTGATAGTAGTGTT
TTTTCTCTAGAGGCGTTAGAAAAATTCAAAATTTATTGTCAGAACATTCAGGAAATGACGATACATAAAATTAATAGATT
TACAGTTGTTTTTAATCGTTATACGAAATCTAAAGTATCACATAAATCAAACAAAAGCTTAAAAAATAGCATTTTTGAAG
AAATTGAGGAGGCAGTAAAAAGAATGTCTTATCCCCTATATAAAATTCCAGAATCCCTTTTAGTTTATCGCTCACAACAG
GAGGGTATGCCAATTTCTCATATTTCACCCACAAGTCAAATTGTTAAAAATTATATGGAAATAGCCAGAGATTTATCATA
A

Upstream 100 bases:

>100_bases
ATATTATTATTGAGTCTATAATCAACTTATAATAACTAGATTTAGTAGAATCATTGTTTTGATCAAAAAAATATATAGTA
AAGATCATAATTCAACAATT

Downstream 100 bases:

>100_bases
CTAAACTTACCATTAATTCATCATAAATAAGCCTGCAATTTTAAGAGATTTTAAAAGCTACTGGGTTTCTAGGGATCTAA
ACTTTTTTAGTAAAAATAGG

Product: chromosome segregation ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAKTIAFANLKGGTGKTTICINIAGCLTIINPKSRILVVDFDPQANATSGLGIDENNLENSIYDVILNQFNQYQGVPITQ
AILATQIENLHLVPSELNLATASILMQQGKDKVGTLNRILTLIKSYYNYILIDVPSDTGLFMLNSLRAADEAVIPIDSSV
FSLEALEKFKIYCQNIQEMTIHKINRFTVVFNRYTKSKVSHKSNKSLKNSIFEEIEEAVKRMSYPLYKIPESLLVYRSQQ
EGMPISHISPTSQIVKNYMEIARDLS

Sequences:

>Translated_266_residues
MAKTIAFANLKGGTGKTTICINIAGCLTIINPKSRILVVDFDPQANATSGLGIDENNLENSIYDVILNQFNQYQGVPITQ
AILATQIENLHLVPSELNLATASILMQQGKDKVGTLNRILTLIKSYYNYILIDVPSDTGLFMLNSLRAADEAVIPIDSSV
FSLEALEKFKIYCQNIQEMTIHKINRFTVVFNRYTKSKVSHKSNKSLKNSIFEEIEEAVKRMSYPLYKIPESLLVYRSQQ
EGMPISHISPTSQIVKNYMEIARDLS
>Mature_265_residues
AKTIAFANLKGGTGKTTICINIAGCLTIINPKSRILVVDFDPQANATSGLGIDENNLENSIYDVILNQFNQYQGVPITQA
ILATQIENLHLVPSELNLATASILMQQGKDKVGTLNRILTLIKSYYNYILIDVPSDTGLFMLNSLRAADEAVIPIDSSVF
SLEALEKFKIYCQNIQEMTIHKINRFTVVFNRYTKSKVSHKSNKSLKNSIFEEIEEAVKRMSYPLYKIPESLLVYRSQQE
GMPISHISPTSQIVKNYMEIARDLS

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29800; Mature: 29669

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTIAFANLKGGTGKTTICINIAGCLTIINPKSRILVVDFDPQANATSGLGIDENNLEN
CCCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHH
SIYDVILNQFNQYQGVPITQAILATQIENLHLVPSELNLATASILMQQGKDKVGTLNRIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
TLIKSYYNYILIDVPSDTGLFMLNSLRAADEAVIPIDSSVFSLEALEKFKIYCQNIQEMT
HHHHHHHCEEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
IHKINRFTVVFNRYTKSKVSHKSNKSLKNSIFEEIEEAVKRMSYPLYKIPESLLVYRSQQ
HHHHHHEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHC
EGMPISHISPTSQIVKNYMEIARDLS
CCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKTIAFANLKGGTGKTTICINIAGCLTIINPKSRILVVDFDPQANATSGLGIDENNLEN
CCEEEEEECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHH
SIYDVILNQFNQYQGVPITQAILATQIENLHLVPSELNLATASILMQQGKDKVGTLNRIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHH
TLIKSYYNYILIDVPSDTGLFMLNSLRAADEAVIPIDSSVFSLEALEKFKIYCQNIQEMT
HHHHHHHCEEEEECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
IHKINRFTVVFNRYTKSKVSHKSNKSLKNSIFEEIEEAVKRMSYPLYKIPESLLVYRSQQ
HHHHHHEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHC
EGMPISHISPTSQIVKNYMEIARDLS
CCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]