| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477624
Identifier: 113477624
GI number: 113477624
Start: 6495320
End: 6495487
Strand: Reverse
Name: 113477624
Synonym: Tery_4210
Alternate gene names: NA
Gene position: 6495487-6495320 (Counterclockwise)
Preceding gene: 113477627
Following gene: 113477622
Centisome position: 83.81
GC content: 36.9
Gene sequence:
>168_bases GTGATTTCCACATATATACGCAATATCGCCCTGACAGCGGCATTTTTAGCAGCAGATGATAATCAAGTAATTGAGATGGT TCACTTAATAAGAGCCATACGTCGAGAGTATGACAAAATGGGCAAAATTCTTCGGGATAAGAATTTAGGTTCCTATATAA ATACCTAA
Upstream 100 bases:
>100_bases CTTTAAATTTGGGTCATCTGTCCATTTTCCAGTTGTAACATAGAATAATTTAATTTTAGGATTCGATTTAAAGCTTGATG CCTTGTCATAAATATGGTTT
Downstream 100 bases:
>100_bases GCACAAAGCAATAATGATTGAAGTTTAAGATTGAAGTTTGAGGAGGGCTTCAAAGTTAAATCAAAATTAACTTTTATGAT TTAAACTGACACAACTATAC
Product: AAA ATPase
Products: NA
Alternate protein names: ATPase Central Domain-Containing Protein
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MISTYIRNIALTAAFLAADDNQVIEMVHLIRAIRREYDKMGKILRDKNLGSYINT
Sequences:
>Translated_55_residues MISTYIRNIALTAAFLAADDNQVIEMVHLIRAIRREYDKMGKILRDKNLGSYINT >Mature_55_residues MISTYIRNIALTAAFLAADDNQVIEMVHLIRAIRREYDKMGKILRDKNLGSYINT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6342; Mature: 6342
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTYIRNIALTAAFLAADDNQVIEMVHLIRAIRREYDKMGKILRDKNLGSYINT CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MISTYIRNIALTAAFLAADDNQVIEMVHLIRAIRREYDKMGKILRDKNLGSYINT CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA