Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476906

Identifier: 113476906

GI number: 113476906

Start: 5198881

End: 5199489

Strand: Reverse

Name: 113476906

Synonym: Tery_3393

Alternate gene names: NA

Gene position: 5199489-5198881 (Counterclockwise)

Preceding gene: 113476907

Following gene: 113476904

Centisome position: 67.09

GC content: 33.5

Gene sequence:

>609_bases
ATGTCTATCCTCTTCTTTTTGAAAAACACATTCTTACTAAGCAGTATAATCATACTATGGGGTTATTTACAGCCAACACT
TAAAGCATTTAATTATCCAATTAATGCTTATAATACCCACAATAATAAAGTATTAATAGCTCAAAAATCTACAGCAGTCG
CTGCAGAATTACAGCAAATTTTGCCAAAAATAAAAGAACAAACTCAAGTACCAATTTTGCTACCTACTCAATTATTAATT
ACAGGTACAGATAGAAAAATTTATGTCGAGGGTAAAGGTACAAGTAATAGTTATGAAATTACCTTAGCCTTTACACCTAA
TTGTAACCATAGTACTGCTTGTTCCATTGGTTATCTTAGTGCTGAAAAAGGAGGTAAACCTTTAGAAGATGAATTTAGTA
GGGAATATCCTTTAGTGCAAAACATTAAAGGATATTTTAGACCTTTAACCTGTGGAGCATCTTGTGCGCCTCCAATTATC
GGCTGGGAATATCAAGGAGTATTTTATCGCATGGCTTTTAAAGGTGTTGGTCAAAGTCCCGAAATTGAAGGAGAAACTTT
AGTAAAAATGGCTAATTCTGCCATTGAAGTAGGGGCAAGATCAGATTAA

Upstream 100 bases:

>100_bases
ACTAGGAAATCTAATAACTGTATACCTGTATTTATAGATAAAACTTATGGCTTTAAACTTCATTCAATATTCAGTTTAGT
CTTTCAGTAGGATTTTAATT

Downstream 100 bases:

>100_bases
TGATACTTGAATAATGATGAGATAATTAGCTATAGAACAAATAAATTAGTTTGAGGGAAAAAGTATTTAAGGATTTAATT
AATACAAAAAAATCATATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSILFFLKNTFLLSSIIILWGYLQPTLKAFNYPINAYNTHNNKVLIAQKSTAVAAELQQILPKIKEQTQVPILLPTQLLI
TGTDRKIYVEGKGTSNSYEITLAFTPNCNHSTACSIGYLSAEKGGKPLEDEFSREYPLVQNIKGYFRPLTCGASCAPPII
GWEYQGVFYRMAFKGVGQSPEIEGETLVKMANSAIEVGARSD

Sequences:

>Translated_202_residues
MSILFFLKNTFLLSSIIILWGYLQPTLKAFNYPINAYNTHNNKVLIAQKSTAVAAELQQILPKIKEQTQVPILLPTQLLI
TGTDRKIYVEGKGTSNSYEITLAFTPNCNHSTACSIGYLSAEKGGKPLEDEFSREYPLVQNIKGYFRPLTCGASCAPPII
GWEYQGVFYRMAFKGVGQSPEIEGETLVKMANSAIEVGARSD
>Mature_201_residues
SILFFLKNTFLLSSIIILWGYLQPTLKAFNYPINAYNTHNNKVLIAQKSTAVAAELQQILPKIKEQTQVPILLPTQLLIT
GTDRKIYVEGKGTSNSYEITLAFTPNCNHSTACSIGYLSAEKGGKPLEDEFSREYPLVQNIKGYFRPLTCGASCAPPIIG
WEYQGVFYRMAFKGVGQSPEIEGETLVKMANSAIEVGARSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22349; Mature: 22218

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILFFLKNTFLLSSIIILWGYLQPTLKAFNYPINAYNTHNNKVLIAQKSTAVAAELQQI
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCHHHHHHHHHH
LPKIKEQTQVPILLPTQLLITGTDRKIYVEGKGTSNSYEITLAFTPNCNHSTACSIGYLS
HHHHHHHCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEE
AEKGGKPLEDEFSREYPLVQNIKGYFRPLTCGASCAPPIIGWEYQGVFYRMAFKGVGQSP
CCCCCCCCHHHHHCCCCHHHHHHHHCEEECCCCCCCCCCCCEECCCEEEEEEECCCCCCC
EIEGETLVKMANSAIEVGARSD
CCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SILFFLKNTFLLSSIIILWGYLQPTLKAFNYPINAYNTHNNKVLIAQKSTAVAAELQQI
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCHHHHHHHHHH
LPKIKEQTQVPILLPTQLLITGTDRKIYVEGKGTSNSYEITLAFTPNCNHSTACSIGYLS
HHHHHHHCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEE
AEKGGKPLEDEFSREYPLVQNIKGYFRPLTCGASCAPPIIGWEYQGVFYRMAFKGVGQSP
CCCCCCCCHHHHHCCCCHHHHHHHHCEEECCCCCCCCCCCCEECCCEEEEEEECCCCCCC
EIEGETLVKMANSAIEVGARSD
CCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA