| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476904
Identifier: 113476904
GI number: 113476904
Start: 5195561
End: 5196652
Strand: Reverse
Name: 113476904
Synonym: Tery_3391
Alternate gene names: NA
Gene position: 5196652-5195561 (Counterclockwise)
Preceding gene: 113476906
Following gene: 113476902
Centisome position: 67.05
GC content: 34.52
Gene sequence:
>1092_bases ATGGCCTTAAACTTTAGATTTGCTGTTGCTAGTGACTTACATATTGCTGTTCCTCATACTATTTCTGAAAAAACACATAG TTTTCATTTAGTAGAAGTTAGCATTCCTGCTTTGGAGTTAGTACTAGAACATTTAAGTAAGTTAGATATTGATTTTTTAC TACTACCTGGAGACCTAACTCAAGATGGTGAACCAGAAAATCATACCTGGCTCAGTCAAAGATTATCTGCACTTCCCTAT CCTGTATATGTAGTTCCTGGTAATCACGATGTACCTGTAAAATTTGCTAATGATTATTCTATTGGTTTAGCCAATTTTCC TAGTTATTATCATCACTGTGGATATGATTACCAGCAAAGATTATATTATAGTGAACAAGTATTGCCTGGAGTTCGGATAA TTGGGTTAAATTCTAATCAATTTGATACTTCAGGAAAACAAAAATATACTGGTGGTTTAGAGTCAGAACAATTAGATTGG TTACAACAGGTTTTAAGCATTGCTGAAGAGGAATTAGTGATAGTCATGCTACATCATAATGTAATTGAACATTTGCCTGA CCAATCTCATAACTCTCTTGGTCGTCGTTACATGTTAGAAAATAGGTCAGTATTGTTAGATATTCTCCAATCTGCAGGTG TTCAGCTTATATTTACTGGTCATCTTCATGTTCAGGATGTTGCTAAAGATCAAGGAATTTATGAAATTACAACTGGTTCT TTAGTTTCTTATCCTCATCCTTATCGCATCATAGATTTTATTACTAATGCCAGTGGTCAAAAGTCTTTAAAGATTGAAAG TTATCGGATTAATTCTTTGCCTAATTTACCTAATCTAAGTGATGTTTCTCGGAGCTGGATCGGCGATCGCTCTGTTTATT TTATGTCTAAACTTTTGACTAGTCCTCCTTTAAATTTATCCCCAGAACTTGCTGCCAAACTTGCTCCTAGTTTGCGTTAT TTCTGGGCTGATATTGCATATGGAGATGCTGTGTTGGACTTTCCTCATTTTCCACCTGAGGTCCGGCGATATTTTCAAAG TTTTAATACCACTAATAGCATTGATAATAATGCAATATTGCTTTTACAATAA
Upstream 100 bases:
>100_bases TATGGCTTAATCTATTCTTGATTACTAATTTTGAAATAAAATAGAAATCTAGAAAAATAATTAACAATTGATTTAGCCTA ATCTCCAAAGGACTTTTTCT
Downstream 100 bases:
>100_bases AATTAGTATATTTCCCTAAGTAAATTATTCTATCTTCTAGCTTTAAGAATCAGCATTCAGCTCCGTATTTCCAGAGAAAC TTGCTTCTAGAGGGATATAG
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Protein Phosphatase Family Protein; Phosphohydrolase; 5-Nucleotidase Domain-Containing Protein; Calcineurin-Like Phosphoesterase; Serine/Threonine Protein Phosphatase; 5-Nucleotidase Domain Protein; Lipoprotein; Ser/Thr Protein Phosphatase Family Protein Family
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MALNFRFAVASDLHIAVPHTISEKTHSFHLVEVSIPALELVLEHLSKLDIDFLLLPGDLTQDGEPENHTWLSQRLSALPY PVYVVPGNHDVPVKFANDYSIGLANFPSYYHHCGYDYQQRLYYSEQVLPGVRIIGLNSNQFDTSGKQKYTGGLESEQLDW LQQVLSIAEEELVIVMLHHNVIEHLPDQSHNSLGRRYMLENRSVLLDILQSAGVQLIFTGHLHVQDVAKDQGIYEITTGS LVSYPHPYRIIDFITNASGQKSLKIESYRINSLPNLPNLSDVSRSWIGDRSVYFMSKLLTSPPLNLSPELAAKLAPSLRY FWADIAYGDAVLDFPHFPPEVRRYFQSFNTTNSIDNNAILLLQ
Sequences:
>Translated_363_residues MALNFRFAVASDLHIAVPHTISEKTHSFHLVEVSIPALELVLEHLSKLDIDFLLLPGDLTQDGEPENHTWLSQRLSALPY PVYVVPGNHDVPVKFANDYSIGLANFPSYYHHCGYDYQQRLYYSEQVLPGVRIIGLNSNQFDTSGKQKYTGGLESEQLDW LQQVLSIAEEELVIVMLHHNVIEHLPDQSHNSLGRRYMLENRSVLLDILQSAGVQLIFTGHLHVQDVAKDQGIYEITTGS LVSYPHPYRIIDFITNASGQKSLKIESYRINSLPNLPNLSDVSRSWIGDRSVYFMSKLLTSPPLNLSPELAAKLAPSLRY FWADIAYGDAVLDFPHFPPEVRRYFQSFNTTNSIDNNAILLLQ >Mature_362_residues ALNFRFAVASDLHIAVPHTISEKTHSFHLVEVSIPALELVLEHLSKLDIDFLLLPGDLTQDGEPENHTWLSQRLSALPYP VYVVPGNHDVPVKFANDYSIGLANFPSYYHHCGYDYQQRLYYSEQVLPGVRIIGLNSNQFDTSGKQKYTGGLESEQLDWL QQVLSIAEEELVIVMLHHNVIEHLPDQSHNSLGRRYMLENRSVLLDILQSAGVQLIFTGHLHVQDVAKDQGIYEITTGSL VSYPHPYRIIDFITNASGQKSLKIESYRINSLPNLPNLSDVSRSWIGDRSVYFMSKLLTSPPLNLSPELAAKLAPSLRYF WADIAYGDAVLDFPHFPPEVRRYFQSFNTTNSIDNNAILLLQ
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41129; Mature: 40998
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNFRFAVASDLHIAVPHTISEKTHSFHLVEVSIPALELVLEHLSKLDIDFLLLPGDLT CEEEEEEEEECCEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCEEEEEECCCCC QDGEPENHTWLSQRLSALPYPVYVVPGNHDVPVKFANDYSIGLANFPSYYHHCGYDYQQR CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCEEECCCCCHHHHHCCCCHHHH LYYSEQVLPGVRIIGLNSNQFDTSGKQKYTGGLESEQLDWLQQVLSIAEEELVIVMLHHN HHHHHHCCCCEEEEECCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH VIEHLPDQSHNSLGRRYMLENRSVLLDILQSAGVQLIFTGHLHVQDVAKDQGIYEITTGS HHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCEEEEHHHCCCCEEEEECCC LVSYPHPYRIIDFITNASGQKSLKIESYRINSLPNLPNLSDVSRSWIGDRSVYFMSKLLT EECCCCCCEEHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHC SPPLNLSPELAAKLAPSLRYFWADIAYGDAVLDFPHFPPEVRRYFQSFNTTNSIDNNAIL CCCCCCCHHHHHHHCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEEE LLQ EEC >Mature Secondary Structure ALNFRFAVASDLHIAVPHTISEKTHSFHLVEVSIPALELVLEHLSKLDIDFLLLPGDLT EEEEEEEEECCEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCEEEEEECCCCC QDGEPENHTWLSQRLSALPYPVYVVPGNHDVPVKFANDYSIGLANFPSYYHHCGYDYQQR CCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCEEECCCCCHHHHHCCCCHHHH LYYSEQVLPGVRIIGLNSNQFDTSGKQKYTGGLESEQLDWLQQVLSIAEEELVIVMLHHN HHHHHHCCCCEEEEECCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEHH VIEHLPDQSHNSLGRRYMLENRSVLLDILQSAGVQLIFTGHLHVQDVAKDQGIYEITTGS HHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCEEEEHHHCCCCEEEEECCC LVSYPHPYRIIDFITNASGQKSLKIESYRINSLPNLPNLSDVSRSWIGDRSVYFMSKLLT EECCCCCCEEHHHHHCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHC SPPLNLSPELAAKLAPSLRYFWADIAYGDAVLDFPHFPPEVRRYFQSFNTTNSIDNNAIL CCCCCCCHHHHHHHCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEEE LLQ EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA