| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476900
Identifier: 113476900
GI number: 113476900
Start: 5191797
End: 5192096
Strand: Reverse
Name: 113476900
Synonym: Tery_3387
Alternate gene names: NA
Gene position: 5192096-5191797 (Counterclockwise)
Preceding gene: 113476901
Following gene: 113476894
Centisome position: 66.99
GC content: 35.0
Gene sequence:
>300_bases ATGAATAATAATATTGCTCATCGTTTGGAACAGTACACAATTAAGCAAGCAAATCAAGTATTAATAGTTAATATAGTAAT TGATCAACAGCCAGATGAAATAGCTATATTTAAAGGTTTTTCTAGTTCTTTGATGCAGCCTACTGCTTTTAATCCAGATG TACCTGTTTTGCCAGAAACAGCTAAGATAATCAGTCTTGATATACTTGAATCTCCCTACAACCCAGAAGCACCTGTTTAT ATTAAACAGGGACTGACCTGGGAGCAAATGCAGTCCCTGTTAATAGAAGTAGGACTTTAG
Upstream 100 bases:
>100_bases AATTAAATTAATTTAAGATTTTAGATGAAGTAGGCAAGAGGCAAAATAAATATAAATTTGATACTACTACATTATTAACA GAGTATTTTACCTACAAACA
Downstream 100 bases:
>100_bases TTAACCATTCCACCAGCCGCCTGCAGGCGTGCTCTGGCTCGCTTTAAGGTTTGTTTAGCCTTAATCTTTTCTTGAAGATT ATCACTACTTTCAGAAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MNNNIAHRLEQYTIKQANQVLIVNIVIDQQPDEIAIFKGFSSSLMQPTAFNPDVPVLPETAKIISLDILESPYNPEAPVY IKQGLTWEQMQSLLIEVGL
Sequences:
>Translated_99_residues MNNNIAHRLEQYTIKQANQVLIVNIVIDQQPDEIAIFKGFSSSLMQPTAFNPDVPVLPETAKIISLDILESPYNPEAPVY IKQGLTWEQMQSLLIEVGL >Mature_99_residues MNNNIAHRLEQYTIKQANQVLIVNIVIDQQPDEIAIFKGFSSSLMQPTAFNPDVPVLPETAKIISLDILESPYNPEAPVY IKQGLTWEQMQSLLIEVGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11136; Mature: 11136
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNIAHRLEQYTIKQANQVLIVNIVIDQQPDEIAIFKGFSSSLMQPTAFNPDVPVLPET CCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECCCCCHHCCCCCCCCCCCCCCCC AKIISLDILESPYNPEAPVYIKQGLTWEQMQSLLIEVGL CCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure MNNNIAHRLEQYTIKQANQVLIVNIVIDQQPDEIAIFKGFSSSLMQPTAFNPDVPVLPET CCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECCCCCHHCCCCCCCCCCCCCCCC AKIISLDILESPYNPEAPVYIKQGLTWEQMQSLLIEVGL CCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA