| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476901
Identifier: 113476901
GI number: 113476901
Start: 5192204
End: 5192824
Strand: Reverse
Name: 113476901
Synonym: Tery_3388
Alternate gene names: NA
Gene position: 5192824-5192204 (Counterclockwise)
Preceding gene: 113476902
Following gene: 113476900
Centisome position: 67.0
GC content: 31.72
Gene sequence:
>621_bases ATGTTGAATTTTTTACCCTTAGCTATTACATCTGGATTAAAAACTTTGATCTGGATGGATTATAGGTTAGCGGTTTTATT TACTGTAGTAATACCTTTATTTCTATTAATTTGGGCTTTTGTTAAAAAATCTGAAGCTATTCAAAACTTGTTGATTATTT ATTGGCGAGTTGCTAGTTTATTAGCTATCTCACTTTACTTAATGATTGCAGCAGTACCTATTAGTTTTTTAACATCATTA ATAGCTCGATTTTTAATTCCTATATCTTTGTGGTTTTGGGTAGATTTGAATGAGGAAATTAGAGATTTACGAAATTCTCC TCTCAAAGCTAGTTTGACTTCTTGGCGTTGGGCTTGTACCACTTATAATTTACTGGGCATAATACTTCAAATTCCTTTTG TGGTTTGTGGTTTCAAATCCCATAATCAATTACTAAGTGATCCTTCTTGTCGTGTTTGGTTAGATCCGCCCTGGTTATTT AAACAAATTTTTCACCCAGATTGGCCTCCAGAATTTATAGGCTTTTTAGGATTTTCTGGATTAGTAATTTATACAATTTT TCTTTCCTATTTCATTTTGGTTAAATTACAGAGACAAGGACGATCTGCTACAGGAAATTAA
Upstream 100 bases:
>100_bases TCTTGCCCATCGCCCATTTGCACACCAACCATGGCCCTGGCTCTTAACTTTGAACTTTTCCAGTCAGCCCTAAAAACGAT TTATAAGTTACTAATTATTT
Downstream 100 bases:
>100_bases TATATAGAATTAAATTAATTTAAGATTTTAGATGAAGTAGGCAAGAGGCAAAATAAATATAAATTTGATACTACTACATT ATTAACAGAGTATTTTACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLNFLPLAITSGLKTLIWMDYRLAVLFTVVIPLFLLIWAFVKKSEAIQNLLIIYWRVASLLAISLYLMIAAVPISFLTSL IARFLIPISLWFWVDLNEEIRDLRNSPLKASLTSWRWACTTYNLLGIILQIPFVVCGFKSHNQLLSDPSCRVWLDPPWLF KQIFHPDWPPEFIGFLGFSGLVIYTIFLSYFILVKLQRQGRSATGN
Sequences:
>Translated_206_residues MLNFLPLAITSGLKTLIWMDYRLAVLFTVVIPLFLLIWAFVKKSEAIQNLLIIYWRVASLLAISLYLMIAAVPISFLTSL IARFLIPISLWFWVDLNEEIRDLRNSPLKASLTSWRWACTTYNLLGIILQIPFVVCGFKSHNQLLSDPSCRVWLDPPWLF KQIFHPDWPPEFIGFLGFSGLVIYTIFLSYFILVKLQRQGRSATGN >Mature_206_residues MLNFLPLAITSGLKTLIWMDYRLAVLFTVVIPLFLLIWAFVKKSEAIQNLLIIYWRVASLLAISLYLMIAAVPISFLTSL IARFLIPISLWFWVDLNEEIRDLRNSPLKASLTSWRWACTTYNLLGIILQIPFVVCGFKSHNQLLSDPSCRVWLDPPWLF KQIFHPDWPPEFIGFLGFSGLVIYTIFLSYFILVKLQRQGRSATGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23800; Mature: 23800
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNFLPLAITSGLKTLIWMDYRLAVLFTVVIPLFLLIWAFVKKSEAIQNLLIIYWRVASL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAISLYLMIAAVPISFLTSLIARFLIPISLWFWVDLNEEIRDLRNSPLKASLTSWRWACT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCCCHHHHHHHHHH TYNLLGIILQIPFVVCGFKSHNQLLSDPSCRVWLDPPWLFKQIFHPDWPPEFIGFLGFSG HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHH LVIYTIFLSYFILVKLQRQGRSATGN HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLNFLPLAITSGLKTLIWMDYRLAVLFTVVIPLFLLIWAFVKKSEAIQNLLIIYWRVASL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAISLYLMIAAVPISFLTSLIARFLIPISLWFWVDLNEEIRDLRNSPLKASLTSWRWACT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCCCHHHHHHHHHH TYNLLGIILQIPFVVCGFKSHNQLLSDPSCRVWLDPPWLFKQIFHPDWPPEFIGFLGFSG HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHH LVIYTIFLSYFILVKLQRQGRSATGN HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA