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The map label for this gene is yciH [C]

Identifier: 113476858

GI number: 113476858

Start: 5126976

End: 5127344

Strand: Reverse

Name: yciH [C]

Synonym: Tery_3343

Alternate gene names: 113476858

Gene position: 5127344-5126976 (Counterclockwise)

Preceding gene: 113476859

Following gene: 113476857

Centisome position: 66.16

GC content: 33.6

Gene sequence:

>369_bases
ATGGCTAATTCTAAACGTAATTTATCTGATCATAAAAATTCTAAAGGCGATCGCCTGGTTTATTCAGAGTTTGGTAATAA
TGCTAATTCTCCAGCGACAGAAAGAGCACTACCAAATTTACCACCAAATCAACAAAACTTAAGAGTACAAGTATCTCGCA
AAGGTCGTAAAGGAAAAACAGTCACAGTTATTAGTGGTTTCCAGTCAAACCAGGAAACTTTAACAGCTTTACTCAAACAA
CTTAAAAATCAATGTGGCGCAGGTGGAACTATTAAAGATAATGAAATTGAAATTCAGGGGGAACATAAACAAAAGTTACT
CGAGATTTTAATTAAATTGGGTTATAAAGCTAAAATTAGTGGAGGTTAA

Upstream 100 bases:

>100_bases
CTAATTTTAATCTCTTAAAAAGGTAAATGTTTTTTGCTTTTTCTTGATATTACTTTCTATTTCTGGCTCCCTTGAAAAAT
TATTTTATTACTTGAAAATT

Downstream 100 bases:

>100_bases
GGTACTTTAGAGATTATAAACTTCAAGATACTTTAAGAATGAAAAATCAGGAAAGTTGAAGAGAGTTTCTGTAGATATCT
ATTAGTAAAGTATGAATTAT

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MANSKRNLSDHKNSKGDRLVYSEFGNNANSPATERALPNLPPNQQNLRVQVSRKGRKGKTVTVISGFQSNQETLTALLKQ
LKNQCGAGGTIKDNEIEIQGEHKQKLLEILIKLGYKAKISGG

Sequences:

>Translated_122_residues
MANSKRNLSDHKNSKGDRLVYSEFGNNANSPATERALPNLPPNQQNLRVQVSRKGRKGKTVTVISGFQSNQETLTALLKQ
LKNQCGAGGTIKDNEIEIQGEHKQKLLEILIKLGYKAKISGG
>Mature_121_residues
ANSKRNLSDHKNSKGDRLVYSEFGNNANSPATERALPNLPPNQQNLRVQVSRKGRKGKTVTVISGFQSNQETLTALLKQL
KNQCGAGGTIKDNEIEIQGEHKQKLLEILIKLGYKAKISGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=105, Percent_Identity=40, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 13370; Mature: 13239

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSKRNLSDHKNSKGDRLVYSEFGNNANSPATERALPNLPPNQQNLRVQVSRKGRKGKT
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCE
VTVISGFQSNQETLTALLKQLKNQCGAGGTIKDNEIEIQGEHKQKLLEILIKLGYKAKIS
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEC
GG
CC
>Mature Secondary Structure 
ANSKRNLSDHKNSKGDRLVYSEFGNNANSPATERALPNLPPNQQNLRVQVSRKGRKGKT
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCCCE
VTVISGFQSNQETLTALLKQLKNQCGAGGTIKDNEIEIQGEHKQKLLEILIKLGYKAKIS
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEC
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]