| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476799
Identifier: 113476799
GI number: 113476799
Start: 5024023
End: 5025174
Strand: Reverse
Name: 113476799
Synonym: Tery_3275
Alternate gene names: NA
Gene position: 5025174-5024023 (Counterclockwise)
Preceding gene: 113476800
Following gene: 113476798
Centisome position: 64.84
GC content: 36.81
Gene sequence:
>1152_bases ATGACAACAAATTTACCCCAAGTCAATAAATCTGCAGTACAAGCAGGTGGCCAACTTAGTTTCTTTGAAAAATATTTGAC TTTCTGGGTAGCATTGTGCATTGTAGCAGGTATATTCTTAGGAAAAACATTTCCTGGTGTTGCCAGAATGTTAGATGCTA TGAGCATTTATCAGGTATCTATCCCTATTGCTATTTGTCTATTTTTTATGATGTATCCTATCATGGTCAAAATAGACTTT ACCCAAGCTAAAAATGCTGCCCGTGCTCCTAAGCCTGTAATTTTAACTTTAGTAGTAAATTGGGTAGTCAAACCTTTTAC AATGGTAGCATTTGCCCAAATTTTTCTTGGTTGGTTATTCCGCTCATTCCTAACAGGTACAGAAATATTAAGGGGTACAG AAGTAGCTCTGGCAGACTCTTATATTGCCGGTGCAATATTACTTGGTATCGCACCTTGTACGGCTATGGTGTTAATGTGG GGTTATCTTTCCTATAGTAACCAGGGGCACACATTAGTAATGGTGGCAATTAATTCCTTGACAATGTTGTTTTTATATGC TCCTCTTGGGCGATGGTTATTGTCAGCAAATAATTTAACAGTACCTTGGGAAACTATTGTTTTATCAGTGCTAATTTATG TTGGTTTACCTTTGGCTTCAGGAATTTATAGTCGTTACTGGATTTTGAAATATAAAGGAAAAGCTTGGTTTGAAGGTCGG TTTATTAATTATTTAAGCCCTGTTTCTACTGGTGCGTTATTGATAACTTTAGTTTTATTGTTTGCTTTTAAGGGAGAATT AATTGTAGAAAATCCATTTCACATATTATTAATAGCAGTACCACTTTTTGTCCAGACTAATTTTATTTTCTTGATTAGTT ATGTAGCAGCTTTGAAAATGAAGTTAGATTACGAAGATGCTGCACCTGCTGCTTTAATTGGAGCGAGTAATCATTTTGAA GTGGCGATCGCAACTGCAGTTACTCTATTTGGCTTAAATTCTGGAGCTGCATTAGCTACGGTAGTGGGAGTCTTAATAGA AGTGCCAGTAATGTTAATGTTGGTGGCAGTATGCCAACGTACAGCTTTTTGGTTTCCTCGCCAACCAGAAAAAGCAACTT TGTTAGACCCCCGTTGTTGTAAATTGGAGTAG
Upstream 100 bases:
>100_bases ACAAAACAAAAGCAGGAACTGTGTTTGGTTGCAAAGCACAGCTCAAGTTAACTATTTTTGCAGTTCTCATTAAACGAACA GAATATTAATTGTACAAACT
Downstream 100 bases:
>100_bases TGCAAATATTTTCTCTGCCAGTCTTTCCTACAAGCCATTATAGTAGAGTGAACATCTTGCTTGGCCATTTTTTTGAATTT TCCAGATACTCATTGACTAT
Product: arsenical-resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MTTNLPQVNKSAVQAGGQLSFFEKYLTFWVALCIVAGIFLGKTFPGVARMLDAMSIYQVSIPIAICLFFMMYPIMVKIDF TQAKNAARAPKPVILTLVVNWVVKPFTMVAFAQIFLGWLFRSFLTGTEILRGTEVALADSYIAGAILLGIAPCTAMVLMW GYLSYSNQGHTLVMVAINSLTMLFLYAPLGRWLLSANNLTVPWETIVLSVLIYVGLPLASGIYSRYWILKYKGKAWFEGR FINYLSPVSTGALLITLVLLFAFKGELIVENPFHILLIAVPLFVQTNFIFLISYVAALKMKLDYEDAAPAALIGASNHFE VAIATAVTLFGLNSGAALATVVGVLIEVPVMLMLVAVCQRTAFWFPRQPEKATLLDPRCCKLE
Sequences:
>Translated_383_residues MTTNLPQVNKSAVQAGGQLSFFEKYLTFWVALCIVAGIFLGKTFPGVARMLDAMSIYQVSIPIAICLFFMMYPIMVKIDF TQAKNAARAPKPVILTLVVNWVVKPFTMVAFAQIFLGWLFRSFLTGTEILRGTEVALADSYIAGAILLGIAPCTAMVLMW GYLSYSNQGHTLVMVAINSLTMLFLYAPLGRWLLSANNLTVPWETIVLSVLIYVGLPLASGIYSRYWILKYKGKAWFEGR FINYLSPVSTGALLITLVLLFAFKGELIVENPFHILLIAVPLFVQTNFIFLISYVAALKMKLDYEDAAPAALIGASNHFE VAIATAVTLFGLNSGAALATVVGVLIEVPVMLMLVAVCQRTAFWFPRQPEKATLLDPRCCKLE >Mature_382_residues TTNLPQVNKSAVQAGGQLSFFEKYLTFWVALCIVAGIFLGKTFPGVARMLDAMSIYQVSIPIAICLFFMMYPIMVKIDFT QAKNAARAPKPVILTLVVNWVVKPFTMVAFAQIFLGWLFRSFLTGTEILRGTEVALADSYIAGAILLGIAPCTAMVLMWG YLSYSNQGHTLVMVAINSLTMLFLYAPLGRWLLSANNLTVPWETIVLSVLIYVGLPLASGIYSRYWILKYKGKAWFEGRF INYLSPVSTGALLITLVLLFAFKGELIVENPFHILLIAVPLFVQTNFIFLISYVAALKMKLDYEDAAPAALIGASNHFEV AIATAVTLFGLNSGAALATVVGVLIEVPVMLMLVAVCQRTAFWFPRQPEKATLLDPRCCKLE
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=341, Percent_Identity=28.1524926686217, Blast_Score=96, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 42229; Mature: 42098
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNLPQVNKSAVQAGGQLSFFEKYLTFWVALCIVAGIFLGKTFPGVARMLDAMSIYQVS CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IPIAICLFFMMYPIMVKIDFTQAKNAARAPKPVILTLVVNWVVKPFTMVAFAQIFLGWLF HHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSFLTGTEILRGTEVALADSYIAGAILLGIAPCTAMVLMWGYLSYSNQGHTLVMVAINSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH TMLFLYAPLGRWLLSANNLTVPWETIVLSVLIYVGLPLASGIYSRYWILKYKGKAWFEGR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCEEECCC FINYLSPVSTGALLITLVLLFAFKGELIVENPFHILLIAVPLFVQTNFIFLISYVAALKM HHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLDYEDAAPAALIGASNHFEVAIATAVTLFGLNSGAALATVVGVLIEVPVMLMLVAVCQR CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TAFWFPRQPEKATLLDPRCCKLE HHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTNLPQVNKSAVQAGGQLSFFEKYLTFWVALCIVAGIFLGKTFPGVARMLDAMSIYQVS CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IPIAICLFFMMYPIMVKIDFTQAKNAARAPKPVILTLVVNWVVKPFTMVAFAQIFLGWLF HHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSFLTGTEILRGTEVALADSYIAGAILLGIAPCTAMVLMWGYLSYSNQGHTLVMVAINSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHH TMLFLYAPLGRWLLSANNLTVPWETIVLSVLIYVGLPLASGIYSRYWILKYKGKAWFEGR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCEEECCC FINYLSPVSTGALLITLVLLFAFKGELIVENPFHILLIAVPLFVQTNFIFLISYVAALKM HHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLDYEDAAPAALIGASNHFEVAIATAVTLFGLNSGAALATVVGVLIEVPVMLMLVAVCQR CCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TAFWFPRQPEKATLLDPRCCKLE HHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]