The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476700

Identifier: 113476700

GI number: 113476700

Start: 4826057

End: 4826836

Strand: Reverse

Name: 113476700

Synonym: Tery_3160

Alternate gene names: NA

Gene position: 4826836-4826057 (Counterclockwise)

Preceding gene: 113476701

Following gene: 113476699

Centisome position: 62.28

GC content: 32.69

Gene sequence:

>780_bases
ATGTCCTTTGCTATGCAGGGAAAAATGGATTATGAAACTTTAGGGAAAACAGGAGGAATTACCACAACTCCTGGAACACC
ACAATGGGCACTTGCAATTAAGTTAAAATTACAATCTGTTCTCAAAAAAAGTATCGTTGCTAATGCAGAACAATTAAAAG
CATGGCGTGAATTAATAAAACAACCAGCAGCTTATCAGCAATTACTTGATGAGGAAGGAAAGCCATTTAATAATTATGAA
GAATTATGTCATGCTCAACCGCCATATGGATTAGGTTGTGAACCAAAAGAAATTGAGGAATTAATTACTGAACTAGAATC
AACTGAAATCAAAAAAGTTGACATTTTAGAAGATCCACTTAAAGATTTAGGAAATCCATCAAATTATTTTCATAAGTTTT
CTAAACTTGTGGAAGCTTGTCCAGAAAATCAAGTTTTAAACGCATCTAAAATAGGAGAAATATTAGATTATGCTCATAGT
ACTGCTCAACTATGGAGAAAACGATGGGAACATTTGGGATGGTTGGAACAATCAAAAAGTGGCGGAAGAGGTTTTTATCA
AATTACTGAATCAGGAAAAACTGCAGTAAAAAATTGGTTGGAACAACAACCAGAAGGTCAATTAAATAAAGAATTATGGA
TAGTAGTTGCTAAGAATCCTAAGAAGGCAGCCGAAAAGTTAATTAAGTCATTTACAACTGAAGATTTAAGAGAAGTTTAC
AAACTAATTGGAGAATCTTTTAGTAAAAAATCAACTGTATTTCGTGGAGATATGAAATGA

Upstream 100 bases:

>100_bases
GGAAAAAATTAATAGCTAAAAATATACCTATTAAAGTATGAGCTAGCAAAAAATAAAATCCTTGGAAACTCAAAAATTAT
CTTAGATAACCTAGAATAAA

Downstream 100 bases:

>100_bases
ATATTATTCTGTAGTTATCATCGGCTTGACTTAGGTCATAATTCAATGTTTATAGCTTAGATTTAAGCTATTAGCTATAT
AATAGCTAATTGTAGATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSFAMQGKMDYETLGKTGGITTTPGTPQWALAIKLKLQSVLKKSIVANAEQLKAWRELIKQPAAYQQLLDEEGKPFNNYE
ELCHAQPPYGLGCEPKEIEELITELESTEIKKVDILEDPLKDLGNPSNYFHKFSKLVEACPENQVLNASKIGEILDYAHS
TAQLWRKRWEHLGWLEQSKSGGRGFYQITESGKTAVKNWLEQQPEGQLNKELWIVVAKNPKKAAEKLIKSFTTEDLREVY
KLIGESFSKKSTVFRGDMK

Sequences:

>Translated_259_residues
MSFAMQGKMDYETLGKTGGITTTPGTPQWALAIKLKLQSVLKKSIVANAEQLKAWRELIKQPAAYQQLLDEEGKPFNNYE
ELCHAQPPYGLGCEPKEIEELITELESTEIKKVDILEDPLKDLGNPSNYFHKFSKLVEACPENQVLNASKIGEILDYAHS
TAQLWRKRWEHLGWLEQSKSGGRGFYQITESGKTAVKNWLEQQPEGQLNKELWIVVAKNPKKAAEKLIKSFTTEDLREVY
KLIGESFSKKSTVFRGDMK
>Mature_258_residues
SFAMQGKMDYETLGKTGGITTTPGTPQWALAIKLKLQSVLKKSIVANAEQLKAWRELIKQPAAYQQLLDEEGKPFNNYEE
LCHAQPPYGLGCEPKEIEELITELESTEIKKVDILEDPLKDLGNPSNYFHKFSKLVEACPENQVLNASKIGEILDYAHST
AQLWRKRWEHLGWLEQSKSGGRGFYQITESGKTAVKNWLEQQPEGQLNKELWIVVAKNPKKAAEKLIKSFTTEDLREVYK
LIGESFSKKSTVFRGDMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29435; Mature: 29304

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAMQGKMDYETLGKTGGITTTPGTPQWALAIKLKLQSVLKKSIVANAEQLKAWRELIK
CCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QPAAYQQLLDEEGKPFNNYEELCHAQPPYGLGCEPKEIEELITELESTEIKKVDILEDPL
CCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
KDLGNPSNYFHKFSKLVEACPENQVLNASKIGEILDYAHSTAQLWRKRWEHLGWLEQSKS
HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
GGRGFYQITESGKTAVKNWLEQQPEGQLNKELWIVVAKNPKKAAEKLIKSFTTEDLREVY
CCCCEEEEHHCCHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCHHHHHHHH
KLIGESFSKKSTVFRGDMK
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SFAMQGKMDYETLGKTGGITTTPGTPQWALAIKLKLQSVLKKSIVANAEQLKAWRELIK
CCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
QPAAYQQLLDEEGKPFNNYEELCHAQPPYGLGCEPKEIEELITELESTEIKKVDILEDPL
CCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
KDLGNPSNYFHKFSKLVEACPENQVLNASKIGEILDYAHSTAQLWRKRWEHLGWLEQSKS
HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
GGRGFYQITESGKTAVKNWLEQQPEGQLNKELWIVVAKNPKKAAEKLIKSFTTEDLREVY
CCCCEEEEHHCCHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHCHHHHHHHH
KLIGESFSKKSTVFRGDMK
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA