| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476699
Identifier: 113476699
GI number: 113476699
Start: 4824904
End: 4825479
Strand: Reverse
Name: 113476699
Synonym: Tery_3159
Alternate gene names: NA
Gene position: 4825479-4824904 (Counterclockwise)
Preceding gene: 113476700
Following gene: 113476698
Centisome position: 62.26
GC content: 32.47
Gene sequence:
>576_bases ATGAGAGAAATTTCGACTGAACAAATGCTTTATTTGCTTTACACTTTTGCTTACTCAATAGAGGGAACGGTAACTAAGAG TACAGTAAGGAACAATTTATCTGAAAAAGACCGCGTATGGGCAAAATCAGTGGCTGAGACTTTATGTGAGTTGAAGTTAT TGGAATCTCCTAAACGAGGCAGAATTCAAATTACTGAGATTGGGATGAAGGCTCTGGTTATTAGTCTTCAAACAACAGAA TATAAGTTCAGGTCTAACAAAGGAGCTAAAATTTTAAATGCTTTGATAGCTTGTTTAAAGTTAGCAACAAAATATAATCA GACAAGTTCTCAAAATGAAGATATGGATTTTGAGACTTTTGTAGATAAGTTTAAAGAGCTTTACCTTGAAGAAAGAAAGC GTCAAGAATTGGAAGGTGTTGTGGCTATTTGTAGTCAAGAAATGTGCTATAAGTTTAGGCAAAATAATCATATTTCTGAA TTGCTACTAGAAAAATATTTTGACAAATTGAAGTCTAATGGTCTAGTATTTGCAGTACAAGAAAACAATAAAGAATTAAT TCAATGGGTGGAATAA
Upstream 100 bases:
>100_bases ATTTCGTTTTATCTAGTAAAATGACTATTCTATAAATTTATACTTCAGGATTATTGGAAGTCTTAAATATATTCATTAAT AAAATTAATAAGAGGAACTA
Downstream 100 bases:
>100_bases ATTATGCCGGAAGATGCAGGAAAAAAAAGATATATTAGAAATTTTTTAAACGAAATTAAACCAGGAGAAGGTTATGTAGA AGATATTTGGATTGAACGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MREISTEQMLYLLYTFAYSIEGTVTKSTVRNNLSEKDRVWAKSVAETLCELKLLESPKRGRIQITEIGMKALVISLQTTE YKFRSNKGAKILNALIACLKLATKYNQTSSQNEDMDFETFVDKFKELYLEERKRQELEGVVAICSQEMCYKFRQNNHISE LLLEKYFDKLKSNGLVFAVQENNKELIQWVE
Sequences:
>Translated_191_residues MREISTEQMLYLLYTFAYSIEGTVTKSTVRNNLSEKDRVWAKSVAETLCELKLLESPKRGRIQITEIGMKALVISLQTTE YKFRSNKGAKILNALIACLKLATKYNQTSSQNEDMDFETFVDKFKELYLEERKRQELEGVVAICSQEMCYKFRQNNHISE LLLEKYFDKLKSNGLVFAVQENNKELIQWVE >Mature_191_residues MREISTEQMLYLLYTFAYSIEGTVTKSTVRNNLSEKDRVWAKSVAETLCELKLLESPKRGRIQITEIGMKALVISLQTTE YKFRSNKGAKILNALIACLKLATKYNQTSSQNEDMDFETFVDKFKELYLEERKRQELEGVVAICSQEMCYKFRQNNHISE LLLEKYFDKLKSNGLVFAVQENNKELIQWVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22306; Mature: 22306
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREISTEQMLYLLYTFAYSIEGTVTKSTVRNNLSEKDRVWAKSVAETLCELKLLESPKRG CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC RIQITEIGMKALVISLQTTEYKFRSNKGAKILNALIACLKLATKYNQTSSQNEDMDFETF CEEEHHHHHHHHHEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VDKFKELYLEERKRQELEGVVAICSQEMCYKFRQNNHISELLLEKYFDKLKSNGLVFAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEE ENNKELIQWVE CCCHHHHHHCC >Mature Secondary Structure MREISTEQMLYLLYTFAYSIEGTVTKSTVRNNLSEKDRVWAKSVAETLCELKLLESPKRG CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC RIQITEIGMKALVISLQTTEYKFRSNKGAKILNALIACLKLATKYNQTSSQNEDMDFETF CEEEHHHHHHHHHEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH VDKFKELYLEERKRQELEGVVAICSQEMCYKFRQNNHISELLLEKYFDKLKSNGLVFAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEE ENNKELIQWVE CCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA