Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is nadB [H]

Identifier: 113476078

GI number: 113476078

Start: 3779129

End: 3779332

Strand: Direct

Name: nadB [H]

Synonym: Tery_2454

Alternate gene names: 113476078

Gene position: 3779129-3779332 (Clockwise)

Preceding gene: 113476077

Following gene: 113476079

Centisome position: 48.76

GC content: 43.63

Gene sequence:

>204_bases
ATGACTAATAATATGGAGAATGCTGCCAAGGCGATCGCTCATCTAGTAGAAATGGGAGTTGCCTTCGACCGCAAAGGAAA
AAAACTGGCAATGACTCTCGAAGCTGCTCACTCTCATCCCCGGGTACTTCATTCAGCAGATACCACAGGTAGAGCTATTA
TTGATACACTCGTTATTGAAGCTCAAGAACGTCCAAATATTTAG

Upstream 100 bases:

>100_bases
CTTATTCTGATATAGCGCATATTCTTAGTGAAGTTGGCTTGATTCTATTTCCTGGTTTTTCTAGATAGTGTCTTTGCGTA
AGTCCTGTTATTGAAAGTCA

Downstream 100 bases:

>100_bases
ATAATTTCCCAGGCAGTAGCATTAAATTTGTGGTTAGCCACACAAAAGGCTCGGGTTCAAGGTATTAGTCTTCTTCACGA
AAGTAAAATCCAATGTTTAA

Product: L-aspartate oxidase

Products: NA

Alternate protein names: LASPO; Quinolinate synthase B [H]

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MTNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIEAQERPNI

Sequences:

>Translated_67_residues
MTNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIEAQERPNI
>Mature_66_residues
TNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIEAQERPNI

Specific function: Catalyzes the oxidation of L-aspartate to iminoaspartate [H]

COG id: COG0029

COG function: function code H; Aspartate oxidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent oxidoreductase 2 family. NadB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR015939
- InterPro:   IPR004112
- InterPro:   IPR005288 [H]

Pfam domain/function: PF00890 FAD_binding_2; PF02910 Succ_DH_flav_C [H]

EC number: =1.4.3.16 [H]

Molecular weight: Translated: 7307; Mature: 7175

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIE
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHH
AQERPNI
CCCCCCC
>Mature Secondary Structure 
TNNMENAAKAIAHLVEMGVAFDRKGKKLAMTLEAAHSHPRVLHSADTTGRAIIDTLVIE
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHH
AQERPNI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]