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The map label for this gene is yogA [H]

Identifier: 113476073

GI number: 113476073

Start: 3773152

End: 3774237

Strand: Direct

Name: yogA [H]

Synonym: Tery_2449

Alternate gene names: 113476073

Gene position: 3773152-3774237 (Clockwise)

Preceding gene: 113476072

Following gene: 113476074

Centisome position: 48.69

GC content: 34.07

Gene sequence:

>1086_bases
ATGACTCATTTAATGAATGCGGTTATTCTTACTGGATTTGGTGGACCAGAAAAACTGGTCTATACTCAAGTTCCTAAACC
AACTCCAAAACCAGGAGAAGTCTTGATTAAAGTGGGAGCTTGTTCGGTAAATAATACAGATATTAATACTCGCACTGGCT
GGTATGCTGCAGAGGATAATTTTCAAGCTATCCTCCAAGATAACACAGAAAATGACCCCAATCATTCTGCTTGCTGGACA
CAACATGGTACCCAGTTTCCTCGAATACAAGGTGCTGATATCGTTGGGAAAGTAATAGAAATTGGGGAAAATGTAGATTC
TAAATTTATCCAACAAAGGGTTATAGTTGATAGTTGGATTCGTAGTGAAAGTCCTAATAATTATCAATATATTGGCAGTG
AATTAGATGGAGGTTTTGCTGAATATACAGTAGTTCCTATTACTAATGTTTATCCAATTAATTCTTCACTTTCTGATATT
GAATTAGCTACATTTCCCTGTTCTTATTCGACAGCAGAAAATATGCTTACTAAAGGAAAAATTACAGCGGAAGATACTGT
GGTAATTATAGGGGCTTCTGGTGGTGTTGGTAGTGCTTTAATTCAATTAAGTAAAATTAGGGGAGCAAAAGTTATTGCTA
TTGTTGGAGCTAATAAAGAAGCTTTTGCTAAAGATTTAGATGCAGATTATGTTTATCGACGAGATAATTTATTAGAGTCT
AATTTAGCTCAACATAAAATTACTGTTGCTTTAGATGTCGTCGGAGGAGATTATTTTAATTTGATGATTAAATCTCTTGA
GCCAAGAGGAAGATACGTTTCCTGTGGAGCGATTCGAAATCCAATGGTTTCTCTAGATTTACGAGATTTGATTTACAAAG
ATTTAGAGATGATTGGAGCAACACGCCTAGAATCAGATGTGTTTCAAAGGTTAGTTAGATACCTAGAAGCAGATTTATTA
AAACCTCTGGTTGCTCAAGTTTTTCAGTTATCTAAAATAAAAGAGGCTCAACAATTTTTTCAAAGTAAAGGTTTCTTTGG
AAAAGTTGTACTTAATATTGAAGAACAAAATATTACAAAAAATTGA

Upstream 100 bases:

>100_bases
AAAATATTTTTTTTTCCTTTTTAGTAAATCTTTTCCCTAAAAGTGAGAGGTAATTATTAATCGTTAATTACTGAAGGAAT
TTGTAGAATAAGCAAAAACA

Downstream 100 bases:

>100_bases
GAATATTAAGAATGAATATTGTCTTAAAACTTGTTGATTGTACTCGGTCAAAACATAATTTGACCTTGCTTTACCAATAC
AACGAAATAACTTTTACAAC

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTHLMNAVILTGFGGPEKLVYTQVPKPTPKPGEVLIKVGACSVNNTDINTRTGWYAAEDNFQAILQDNTENDPNHSACWT
QHGTQFPRIQGADIVGKVIEIGENVDSKFIQQRVIVDSWIRSESPNNYQYIGSELDGGFAEYTVVPITNVYPINSSLSDI
ELATFPCSYSTAENMLTKGKITAEDTVVIIGASGGVGSALIQLSKIRGAKVIAIVGANKEAFAKDLDADYVYRRDNLLES
NLAQHKITVALDVVGGDYFNLMIKSLEPRGRYVSCGAIRNPMVSLDLRDLIYKDLEMIGATRLESDVFQRLVRYLEADLL
KPLVAQVFQLSKIKEAQQFFQSKGFFGKVVLNIEEQNITKN

Sequences:

>Translated_361_residues
MTHLMNAVILTGFGGPEKLVYTQVPKPTPKPGEVLIKVGACSVNNTDINTRTGWYAAEDNFQAILQDNTENDPNHSACWT
QHGTQFPRIQGADIVGKVIEIGENVDSKFIQQRVIVDSWIRSESPNNYQYIGSELDGGFAEYTVVPITNVYPINSSLSDI
ELATFPCSYSTAENMLTKGKITAEDTVVIIGASGGVGSALIQLSKIRGAKVIAIVGANKEAFAKDLDADYVYRRDNLLES
NLAQHKITVALDVVGGDYFNLMIKSLEPRGRYVSCGAIRNPMVSLDLRDLIYKDLEMIGATRLESDVFQRLVRYLEADLL
KPLVAQVFQLSKIKEAQQFFQSKGFFGKVVLNIEEQNITKN
>Mature_360_residues
THLMNAVILTGFGGPEKLVYTQVPKPTPKPGEVLIKVGACSVNNTDINTRTGWYAAEDNFQAILQDNTENDPNHSACWTQ
HGTQFPRIQGADIVGKVIEIGENVDSKFIQQRVIVDSWIRSESPNNYQYIGSELDGGFAEYTVVPITNVYPINSSLSDIE
LATFPCSYSTAENMLTKGKITAEDTVVIIGASGGVGSALIQLSKIRGAKVIAIVGANKEAFAKDLDADYVYRRDNLLESN
LAQHKITVALDVVGGDYFNLMIKSLEPRGRYVSCGAIRNPMVSLDLRDLIYKDLEMIGATRLESDVFQRLVRYLEADLLK
PLVAQVFQLSKIKEAQQFFQSKGFFGKVVLNIEEQNITKN

Specific function: Not Known; Probable Catabolic Enzyme. [C]

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=376, Percent_Identity=26.8617021276596, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI22538444, Length=376, Percent_Identity=26.8617021276596, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI194239674, Length=363, Percent_Identity=25.3443526170799, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI13236495, Length=363, Percent_Identity=25.3443526170799, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI24308257, Length=391, Percent_Identity=25.5754475703325, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1787863, Length=361, Percent_Identity=23.8227146814404, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1790045, Length=360, Percent_Identity=23.6111111111111, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17507255, Length=371, Percent_Identity=24.5283018867925, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17536829, Length=277, Percent_Identity=26.7148014440433, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: 1.1.1.- [C]

Molecular weight: Translated: 39879; Mature: 39748

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLMNAVILTGFGGPEKLVYTQVPKPTPKPGEVLIKVGACSVNNTDINTRTGWYAAEDN
CCCHHEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEECEECCCCCCCCCCCEEEECCC
FQAILQDNTENDPNHSACWTQHGTQFPRIQGADIVGKVIEIGENVDSKFIQQRVIVDSWI
HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RSESPNNYQYIGSELDGGFAEYTVVPITNVYPINSSLSDIELATFPCSYSTAENMLTKGK
HCCCCCCCEEECCCCCCCEEEEEEEEECEEEECCCCCCCCEEEECCCCCCHHHHHHHCCC
ITAEDTVVIIGASGGVGSALIQLSKIRGAKVIAIVGANKEAFAKDLDADYVYRRDNLLES
EEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCEECCCCHHHH
NLAQHKITVALDVVGGDYFNLMIKSLEPRGRYVSCGAIRNPMVSLDLRDLIYKDLEMIGA
HHHHEEEEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCEEEECHHHHHHHHHHHHHH
TRLESDVFQRLVRYLEADLLKPLVAQVFQLSKIKEAQQFFQSKGFFGKVVLNIEEQNITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCC
N
C
>Mature Secondary Structure 
THLMNAVILTGFGGPEKLVYTQVPKPTPKPGEVLIKVGACSVNNTDINTRTGWYAAEDN
CCHHEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEECEECCCCCCCCCCCEEEECCC
FQAILQDNTENDPNHSACWTQHGTQFPRIQGADIVGKVIEIGENVDSKFIQQRVIVDSWI
HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RSESPNNYQYIGSELDGGFAEYTVVPITNVYPINSSLSDIELATFPCSYSTAENMLTKGK
HCCCCCCCEEECCCCCCCEEEEEEEEECEEEECCCCCCCCEEEECCCCCCHHHHHHHCCC
ITAEDTVVIIGASGGVGSALIQLSKIRGAKVIAIVGANKEAFAKDLDADYVYRRDNLLES
EEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCEECCCCHHHH
NLAQHKITVALDVVGGDYFNLMIKSLEPRGRYVSCGAIRNPMVSLDLRDLIYKDLEMIGA
HHHHEEEEEEEEECCCHHHHHHHHCCCCCCCEEECCCCCCCEEEECHHHHHHHHHHHHHH
TRLESDVFQRLVRYLEADLLKPLVAQVFQLSKIKEAQQFFQSKGFFGKVVLNIEEQNITK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]