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The map label for this gene is perM [H]

Identifier: 113476022

GI number: 113476022

Start: 3695481

End: 3696530

Strand: Direct

Name: perM [H]

Synonym: Tery_2392

Alternate gene names: 113476022

Gene position: 3695481-3696530 (Clockwise)

Preceding gene: 113476021

Following gene: 113476023

Centisome position: 47.68

GC content: 31.81

Gene sequence:

>1050_bases
GTGAACCTAGGTAATTGGATTGGTATATTTACCATCCTCACTTCTATATACATATTGTGGCAAATTCGTCAATTATTATT
GTTAGTATTTACTGCAATGGTAATCGCTACCACTCTTAATAAACTATCCAGAAAGCTCCAAAGTTTAAAAATCAAACGTT
CTCTAGCTGTATTAATATCCGTCAGCTTATTTATTTTACTAATTGTCACCTTTTTCTGGGTAATTGTTCCCCCTTTAGCA
GAACAGTTTCAACAACTAATCACTATTGTCCCCCAGGGAATTAACAAATTAAATGACTGGTTGAATATACTTAGAGATCA
ATTACCAAATCAACTGAAAGAACAATTACCAGATATTGATATTAATGAAATTATTCCTCAACTACAACCAATACTTAATC
AATTAATTAATAATGCTGGAGAATTTGTTGGTAATACTTTTGGGATATTTCTGAGCTTACTACTAACCTTTGTATTAAGC
ATGATGATGTTAGTAGATCCAATCTCTTATCGTCAAGGGATGATCAAATTATTCCCCTCTTTTTATCGACAACGAGTGAA
CTTAATTTTAGATAATTGTGAAATAGCCTTAGGAGGATGGGTACTTCATTCTTTATTGAAGATGAGTGTAGTTACTTTAC
TCAGTTTTATAGGTTTATCTATATTGAAAATTCCTCTGAGTTCTGCTCAAGCGGTTTTAGCAGGGGTACTAACCTTAATA
CCACATATTGGACTAATTATCAGTATAATTCCTCCAATGGTGATCGCTCTTTTATATTCACCCTTAAAATCTGCTTTAGT
TTTACTAATTTACATTCTCATTCAACAAATTGAACATAATATTTTGAATCCTTACTTCATAGTCAAAAAAGTATCTTTGT
TACCTGCGATCACATTAATTTCTCAAGTATTCTTTGCTCATTTTTTTGGTGTTTTAGGGCTTGTACTAGCCTTACCTTTA
ACAATTATTTGTCAAGTATGGGTCAAGGAATTATTGATCACAGATATTCTTGATAACTGGCAACTTGAAAATATTCCTCC
TCAAAGATAG

Upstream 100 bases:

>100_bases
CCTAGTCTTTTTATTAGCTTAAACCGACTTCTTGACTTATAAACATAATTAGAATATATTAATTCATATATTTGCAACCT
ATACTTTAACTCTAATTCCT

Downstream 100 bases:

>100_bases
CATATTAATGCTTTACCTAAAAAAAAGCTCAAGTTCTAGAATCAAAAAATTGATTAGAGAATTGAAAAAAAAATATTCCC
ACTGCAAAAGCTGCCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNLGNWIGIFTILTSIYILWQIRQLLLLVFTAMVIATTLNKLSRKLQSLKIKRSLAVLISVSLFILLIVTFFWVIVPPLA
EQFQQLITIVPQGINKLNDWLNILRDQLPNQLKEQLPDIDINEIIPQLQPILNQLINNAGEFVGNTFGIFLSLLLTFVLS
MMMLVDPISYRQGMIKLFPSFYRQRVNLILDNCEIALGGWVLHSLLKMSVVTLLSFIGLSILKIPLSSAQAVLAGVLTLI
PHIGLIISIIPPMVIALLYSPLKSALVLLIYILIQQIEHNILNPYFIVKKVSLLPAITLISQVFFAHFFGVLGLVLALPL
TIICQVWVKELLITDILDNWQLENIPPQR

Sequences:

>Translated_349_residues
MNLGNWIGIFTILTSIYILWQIRQLLLLVFTAMVIATTLNKLSRKLQSLKIKRSLAVLISVSLFILLIVTFFWVIVPPLA
EQFQQLITIVPQGINKLNDWLNILRDQLPNQLKEQLPDIDINEIIPQLQPILNQLINNAGEFVGNTFGIFLSLLLTFVLS
MMMLVDPISYRQGMIKLFPSFYRQRVNLILDNCEIALGGWVLHSLLKMSVVTLLSFIGLSILKIPLSSAQAVLAGVLTLI
PHIGLIISIIPPMVIALLYSPLKSALVLLIYILIQQIEHNILNPYFIVKKVSLLPAITLISQVFFAHFFGVLGLVLALPL
TIICQVWVKELLITDILDNWQLENIPPQR
>Mature_349_residues
MNLGNWIGIFTILTSIYILWQIRQLLLLVFTAMVIATTLNKLSRKLQSLKIKRSLAVLISVSLFILLIVTFFWVIVPPLA
EQFQQLITIVPQGINKLNDWLNILRDQLPNQLKEQLPDIDINEIIPQLQPILNQLINNAGEFVGNTFGIFLSLLLTFVLS
MMMLVDPISYRQGMIKLFPSFYRQRVNLILDNCEIALGGWVLHSLLKMSVVTLLSFIGLSILKIPLSSAQAVLAGVLTLI
PHIGLIISIIPPMVIALLYSPLKSALVLLIYILIQQIEHNILNPYFIVKKVSLLPAITLISQVFFAHFFGVLGLVLALPL
TIICQVWVKELLITDILDNWQLENIPPQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=321, Percent_Identity=24.9221183800623, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788838, Length=296, Percent_Identity=22.6351351351351, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39424; Mature: 39424

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLGNWIGIFTILTSIYILWQIRQLLLLVFTAMVIATTLNKLSRKLQSLKIKRSLAVLIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLFILLIVTFFWVIVPPLAEQFQQLITIVPQGINKLNDWLNILRDQLPNQLKEQLPDID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
INEIIPQLQPILNQLINNAGEFVGNTFGIFLSLLLTFVLSMMMLVDPISYRQGMIKLFPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
FYRQRVNLILDNCEIALGGWVLHSLLKMSVVTLLSFIGLSILKIPLSSAQAVLAGVLTLI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PHIGLIISIIPPMVIALLYSPLKSALVLLIYILIQQIEHNILNPYFIVKKVSLLPAITLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SQVFFAHFFGVLGLVLALPLTIICQVWVKELLITDILDNWQLENIPPQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNLGNWIGIFTILTSIYILWQIRQLLLLVFTAMVIATTLNKLSRKLQSLKIKRSLAVLIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSLFILLIVTFFWVIVPPLAEQFQQLITIVPQGINKLNDWLNILRDQLPNQLKEQLPDID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC
INEIIPQLQPILNQLINNAGEFVGNTFGIFLSLLLTFVLSMMMLVDPISYRQGMIKLFPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
FYRQRVNLILDNCEIALGGWVLHSLLKMSVVTLLSFIGLSILKIPLSSAQAVLAGVLTLI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PHIGLIISIIPPMVIALLYSPLKSALVLLIYILIQQIEHNILNPYFIVKKVSLLPAITLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
SQVFFAHFFGVLGLVLALPLTIICQVWVKELLITDILDNWQLENIPPQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]