Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475997

Identifier: 113475997

GI number: 113475997

Start: 3651037

End: 3653145

Strand: Direct

Name: 113475997

Synonym: Tery_2365

Alternate gene names: NA

Gene position: 3651037-3653145 (Clockwise)

Preceding gene: 113475994

Following gene: 113476003

Centisome position: 47.11

GC content: 43.62

Gene sequence:

>2109_bases
GTGCCAGACTTTGCAGATATTCCCGGACTCACCAAATTATGGACTCACACGAAAGGAGACCCTCGCATCACAGTTGCCCT
CCTCGATGGAACTGCTGATATAGAACGTGGTTGCTTTCAGGGGGCCAATGTTACGAAAATCAATTCTTATTGGCAAGAAG
CAATAGAGCTTGACCCCAAAGATATAGACACCTACCGAGAAATTCAGAACTCTGATGAAAAAAGTGAAGTTAAACAGGCA
AAACTGAAAGAAGCTATCCCAGACGAAATAACTTTACAAATTCTCGGAGCAGCTTTCCACGCGACTCATGTCTTTAGTAA
CATTTTCGGACAACCAGGAACTCCCGTGGAAGGTATTGCCTACAAATGTCGGGGCATTAATATTCCTCTTGGTTATGGTA
ATGACTATTATATCGACCCCATAAACTTAGCTCGTGGCATTAACCTAGCAGTAGACTTGGGAGCAAATATTATTCACTGT
GCTGCCTGTCGCCCTAACCAAACTGGTATTGGTCACGAAATTCTAGAAAAGGCAGTACGTCAAGCTCAGGAAAATAATGT
TTTAATTGTGGCTCCCACAGGCAATAATAAAGGTGAATGTTGGTGTCTCCCTGCTATTTTGCCTGGAGTCATGTCCGTAG
GAGCAATGAAGGATAATGGTCAGGTATTCAAATTTAGTAACTGGGGCGGACAATATCAACAACAAGGTATTATTGCTCCG
GGGGAAAATATTCTCGGTGCTCAACCAGGAACAGAAGAAACTGTCCGCCAAAAAGGTACCAGTTGTGCAGCGCCAATGGT
GACAGCTATTTCGGCATTGCTGATGAGTTTGCAGTTGCAGCAAGGAGCATCTCCAGATGCAGAAGCAGTGAGGGCAGCTT
TAACAAACAGTGCTATTCCCTGCACTTTAGAAGATACCGAAGAAATCGAACGTTGTATGTTGGGTAAACTGAATGTTGCC
GGAGCTTATCAACTTTTGACAGGAAAGCAGTTAGAAGCAGTGGGAGTTTCTGCGGCTGAAGCGACCTCAGAAGAAGATGT
AATATTGGAAGATAGTGGGGTTGATGTGGGGGAAGTTATTGTAGATGAAACTTCAGTAGTTCCTGCCCAGGAAAATGCTC
CCATATCTTTTTCTCTGCCAGTGGGAGAAAATAGAGAGAGTCTGACAAATGTGGCAACAAATATCACTGCTGCATCGGGA
GTAGAGCAAAACAATATCAAACCCACAAAAGTTTCTCAAACTGCTCATGGTGTTACCCCGAGTGCTCGCTCCAATATGAT
TTATGCTTTGGGTACCTTGGGTTATGATTTTGGTACTGAGGCACGACGAGACTCATTTAAACAGTTAATGCCAGCAGTGA
TATTAAACGGGGTACAAGTTCCAGCTAATCCCTATGATGGTCGTCAGATGGCTGATTATCTGGATGCTAATTTATATGAA
GGGAAATCTTTAATCTGGACTTTCAATATAGAATTAACTCCTATTTATGCCCTCAGACCTGTAGGTGCATTTGCGGACGA
TATTTATGAAACTCTGCAAAATATGTTAGCAGGAGAGGTGGAGGCAGAAGACCATGAAGACTACATCGACAGGGTGAGTA
TTACCGGGAGGTTAACTGACCAAACAGTAAAGTTGTTTTCTGGGCAAACCCTGCCGGTGGTGAAAATAAACAGCCCCCGG
GGAATGTATGGTTGGACGGTGAATAGCCTAATAGATAATGCTTTGGAGTCAGTTAGGACAGAACAAACAGAGGCAGAGGA
GGAGGCAATACGGAAATCTCTGAGAAGTTTTTTGCAACGGGTTTATTATGATCTGCGCAACCTGGGTCAGGCAGATCGCG
ATCGCGCCATCAACTTTGCAGCGACAAATGCTTTCCAAGCAACGGCGACTATTTCTGAAGCAGTAGCTATTGGCATGGAG
TTGCACAGTATAGAGGTAGAGAAGAGTCCTTTCTGTCGTTACAATAGTAACTGTTGGGATGTTAAGTTGAAATTTTTTAA
CCCAGATAATAGTAGGAGAGCCAAGAGAGTTTATCGTTTTACTATTGATGTGTCAGATTTAATGCCTGTAACTTTGGGTA
AAGTGCGGTCTTGGTCTGTGCCTAAGTGA

Upstream 100 bases:

>100_bases
TAATCATAATAGAACAAACTTGACAATTCTTAATTGGTTGCCTATTTGCCAACTTTAGGTGTAAACTTAGTCTGGAAATG
TAATTTATATTGAATGAATT

Downstream 100 bases:

>100_bases
AGACAGGAGTTTTGTTTGTAGTTTTGCTCTAGCCCTAACAATATATGGGGTTTGAACAAAACTACGAAACTACGAAAGTA
ATCAAATAAATATTCGATGA

Product: peptidase S8/S53 subtilisin kexin sedolisin

Products: NA

Alternate protein names: Protease; Methyltransferase Type; Peptidase PatA-Like Protein; Subtilisin-Like Serine Protease; Peptidase PatG-Like Protein; Serine Protease; Subtilase Family Protease; Peptidase S8/S53 Subtilisin Kexin Sedolisin

Number of amino acids: Translated: 702; Mature: 701

Protein sequence:

>702_residues
MPDFADIPGLTKLWTHTKGDPRITVALLDGTADIERGCFQGANVTKINSYWQEAIELDPKDIDTYREIQNSDEKSEVKQA
KLKEAIPDEITLQILGAAFHATHVFSNIFGQPGTPVEGIAYKCRGINIPLGYGNDYYIDPINLARGINLAVDLGANIIHC
AACRPNQTGIGHEILEKAVRQAQENNVLIVAPTGNNKGECWCLPAILPGVMSVGAMKDNGQVFKFSNWGGQYQQQGIIAP
GENILGAQPGTEETVRQKGTSCAAPMVTAISALLMSLQLQQGASPDAEAVRAALTNSAIPCTLEDTEEIERCMLGKLNVA
GAYQLLTGKQLEAVGVSAAEATSEEDVILEDSGVDVGEVIVDETSVVPAQENAPISFSLPVGENRESLTNVATNITAASG
VEQNNIKPTKVSQTAHGVTPSARSNMIYALGTLGYDFGTEARRDSFKQLMPAVILNGVQVPANPYDGRQMADYLDANLYE
GKSLIWTFNIELTPIYALRPVGAFADDIYETLQNMLAGEVEAEDHEDYIDRVSITGRLTDQTVKLFSGQTLPVVKINSPR
GMYGWTVNSLIDNALESVRTEQTEAEEEAIRKSLRSFLQRVYYDLRNLGQADRDRAINFAATNAFQATATISEAVAIGME
LHSIEVEKSPFCRYNSNCWDVKLKFFNPDNSRRAKRVYRFTIDVSDLMPVTLGKVRSWSVPK

Sequences:

>Translated_702_residues
MPDFADIPGLTKLWTHTKGDPRITVALLDGTADIERGCFQGANVTKINSYWQEAIELDPKDIDTYREIQNSDEKSEVKQA
KLKEAIPDEITLQILGAAFHATHVFSNIFGQPGTPVEGIAYKCRGINIPLGYGNDYYIDPINLARGINLAVDLGANIIHC
AACRPNQTGIGHEILEKAVRQAQENNVLIVAPTGNNKGECWCLPAILPGVMSVGAMKDNGQVFKFSNWGGQYQQQGIIAP
GENILGAQPGTEETVRQKGTSCAAPMVTAISALLMSLQLQQGASPDAEAVRAALTNSAIPCTLEDTEEIERCMLGKLNVA
GAYQLLTGKQLEAVGVSAAEATSEEDVILEDSGVDVGEVIVDETSVVPAQENAPISFSLPVGENRESLTNVATNITAASG
VEQNNIKPTKVSQTAHGVTPSARSNMIYALGTLGYDFGTEARRDSFKQLMPAVILNGVQVPANPYDGRQMADYLDANLYE
GKSLIWTFNIELTPIYALRPVGAFADDIYETLQNMLAGEVEAEDHEDYIDRVSITGRLTDQTVKLFSGQTLPVVKINSPR
GMYGWTVNSLIDNALESVRTEQTEAEEEAIRKSLRSFLQRVYYDLRNLGQADRDRAINFAATNAFQATATISEAVAIGME
LHSIEVEKSPFCRYNSNCWDVKLKFFNPDNSRRAKRVYRFTIDVSDLMPVTLGKVRSWSVPK
>Mature_701_residues
PDFADIPGLTKLWTHTKGDPRITVALLDGTADIERGCFQGANVTKINSYWQEAIELDPKDIDTYREIQNSDEKSEVKQAK
LKEAIPDEITLQILGAAFHATHVFSNIFGQPGTPVEGIAYKCRGINIPLGYGNDYYIDPINLARGINLAVDLGANIIHCA
ACRPNQTGIGHEILEKAVRQAQENNVLIVAPTGNNKGECWCLPAILPGVMSVGAMKDNGQVFKFSNWGGQYQQQGIIAPG
ENILGAQPGTEETVRQKGTSCAAPMVTAISALLMSLQLQQGASPDAEAVRAALTNSAIPCTLEDTEEIERCMLGKLNVAG
AYQLLTGKQLEAVGVSAAEATSEEDVILEDSGVDVGEVIVDETSVVPAQENAPISFSLPVGENRESLTNVATNITAASGV
EQNNIKPTKVSQTAHGVTPSARSNMIYALGTLGYDFGTEARRDSFKQLMPAVILNGVQVPANPYDGRQMADYLDANLYEG
KSLIWTFNIELTPIYALRPVGAFADDIYETLQNMLAGEVEAEDHEDYIDRVSITGRLTDQTVKLFSGQTLPVVKINSPRG
MYGWTVNSLIDNALESVRTEQTEAEEEAIRKSLRSFLQRVYYDLRNLGQADRDRAINFAATNAFQATATISEAVAIGMEL
HSIEVEKSPFCRYNSNCWDVKLKFFNPDNSRRAKRVYRFTIDVSDLMPVTLGKVRSWSVPK

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76595; Mature: 76464

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFADIPGLTKLWTHTKGDPRITVALLDGTADIERGCFQGANVTKINSYWQEAIELDPK
CCCCCCCCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCEEHHHHHHHHHHHCCCC
DIDTYREIQNSDEKSEVKQAKLKEAIPDEITLQILGAAFHATHVFSNIFGQPGTPVEGIA
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
YKCRGINIPLGYGNDYYIDPINLARGINLAVDLGANIIHCAACRPNQTGIGHEILEKAVR
EEEEEEEEEECCCCCEEECCHHHHCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHH
QAQENNVLIVAPTGNNKGECWCLPAILPGVMSVGAMKDNGQVFKFSNWGGQYQQQGIIAP
HHHHCCEEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCC
GENILGAQPGTEETVRQKGTSCAAPMVTAISALLMSLQLQQGASPDAEAVRAALTNSAIP
CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
CTLEDTEEIERCMLGKLNVAGAYQLLTGKQLEAVGVSAAEATSEEDVILEDSGVDVGEVI
EEECCHHHHHHHHHCCCCCCCCEEECCCCCCHHHCCCHHHCCCCCCEEEECCCCCHHHEE
VDETSVVPAQENAPISFSLPVGENRESLTNVATNITAASGVEQNNIKPTKVSQTAHGVTP
ECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHCCCCC
SARSNMIYALGTLGYDFGTEARRDSFKQLMPAVILNGVQVPANPYDGRQMADYLDANLYE
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC
GKSLIWTFNIELTPIYALRPVGAFADDIYETLQNMLAGEVEAEDHEDYIDRVSITGRLTD
CCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECH
QTVKLFSGQTLPVVKINSPRGMYGWTVNSLIDNALESVRTEQTEAEEEAIRKSLRSFLQR
HHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYYDLRNLGQADRDRAINFAATNAFQATATISEAVAIGMELHSIEVEKSPFCRYNSNCWD
HHHHHHHCCCCCHHCEEEEEECCCHHHHHHHHHHHHHCEEEEEEEECCCCCEEECCCEEE
VKLKFFNPDNSRRAKRVYRFTIDVSDLMPVTLGKVRSWSVPK
EEEEEECCCCCHHHEEEEEEEEEHHHCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
PDFADIPGLTKLWTHTKGDPRITVALLDGTADIERGCFQGANVTKINSYWQEAIELDPK
CCCCCCCCHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCEEHHHHHHHHHHHCCCC
DIDTYREIQNSDEKSEVKQAKLKEAIPDEITLQILGAAFHATHVFSNIFGQPGTPVEGIA
HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
YKCRGINIPLGYGNDYYIDPINLARGINLAVDLGANIIHCAACRPNQTGIGHEILEKAVR
EEEEEEEEEECCCCCEEECCHHHHCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHH
QAQENNVLIVAPTGNNKGECWCLPAILPGVMSVGAMKDNGQVFKFSNWGGQYQQQGIIAP
HHHHCCEEEEEECCCCCCCEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCCCCC
GENILGAQPGTEETVRQKGTSCAAPMVTAISALLMSLQLQQGASPDAEAVRAALTNSAIP
CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
CTLEDTEEIERCMLGKLNVAGAYQLLTGKQLEAVGVSAAEATSEEDVILEDSGVDVGEVI
EEECCHHHHHHHHHCCCCCCCCEEECCCCCCHHHCCCHHHCCCCCCEEEECCCCCHHHEE
VDETSVVPAQENAPISFSLPVGENRESLTNVATNITAASGVEQNNIKPTKVSQTAHGVTP
ECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHCCCCC
SARSNMIYALGTLGYDFGTEARRDSFKQLMPAVILNGVQVPANPYDGRQMADYLDANLYE
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC
GKSLIWTFNIELTPIYALRPVGAFADDIYETLQNMLAGEVEAEDHEDYIDRVSITGRLTD
CCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECH
QTVKLFSGQTLPVVKINSPRGMYGWTVNSLIDNALESVRTEQTEAEEEAIRKSLRSFLQR
HHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYYDLRNLGQADRDRAINFAATNAFQATATISEAVAIGMELHSIEVEKSPFCRYNSNCWD
HHHHHHHCCCCCHHCEEEEEECCCHHHHHHHHHHHHHCEEEEEEEECCCCCEEECCCEEE
VKLKFFNPDNSRRAKRVYRFTIDVSDLMPVTLGKVRSWSVPK
EEEEEECCCCCHHHEEEEEEEEEHHHCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA