| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475994
Identifier: 113475994
GI number: 113475994
Start: 3647884
End: 3649884
Strand: Direct
Name: 113475994
Synonym: Tery_2362
Alternate gene names: NA
Gene position: 3647884-3649884 (Clockwise)
Preceding gene: 113475993
Following gene: 113475997
Centisome position: 47.07
GC content: 44.33
Gene sequence:
>2001_bases ATGCCCGAAATTTCTTCAATTCCTGGAATCAAACAACTATGGGCAAAAACCAAAGGTAACTCTGAGGTTTGCGTGGCAGT GCTTGACGGTCTAGTTGACCTGAAACATCCTTGTTTTGAGGGAGCTAATTTGACTCAACTACCAAGCTTAGTTCAAGGTC AAGCTACTCCTCAAAGCGAGATGTCTCTCCATGGGACTCATGTGGCCAGTATAATTTTTGGTCAGCCAAACTCAAGCGTC TCTGGTATTGCTCCCCACTGTCGAGGTTTAATAGTTCCCATATTCTCAGACTATCATCGCCGAACTTCTCAGTTGAATTT AGCACGGGCCATCGAACAAGCGGTGAATGCTGGGGCTAATATTATTAATATTAGTGGGGGTGAACTGACAGATTATGGTG AAGCTGAAGACTGGCTTAACCGTGCGGTGAGTTTATGCCAAAATAATAATGTTTTGCTTGTTGCTGCAGCGGGTAATGAC GGCTGTGAATGTTTGCATGTTCCGGCAGCACTACCCACTGTTCTAGCAGCAGGAGCCATGGGAGAAAACGGACAGCCCCT AGATTATAGTAACTGGGGCGAAAATTATCAGACTCAAGGTATTCTGGCTCTGGGAGAAAATATTTTAGGTGCTGAACCAG GAGGTGGTACAAGACAGTTGAGTGGGACCAGCTTTGCCACCCCAGTAGTGTCAGGAGTTGCTGCATTATTGATGAGTTTG CAGTTGCAAAGAGAGGAAAAACCAGACTCACAAAAAGTGCGTACTGCCTTACTCAAGACAGCTGTTCCATGTCATGCTCA AGAAAAACGCCGTTGTTTAGTTGGCCAGATGAATATTTCAGGTGCCATTGCACATATAACAGGAGAAACTATGTCAGAAT CAGAACAAGATAATAGTAATGGTATTGAAGCTAGCTGTGGTTGTGAGTCAACTCCAGAAGCTAGCTTGCCAGGTTCAGTT GGCCTAGAAAATAGTCTACCGACTCCCGCCGACAATGGTGTGGTAGCTGCAGGGGTCGTTGAAGCTGGCGTCACGGCTTC ACAACCATTATCATCAACTAATACATCTAATACATCTAATAATCAAATTTCTGCTATGCCAAATAATAGTCAAAGTAACA ATAGTAATGGAATCACACCCAGTCAACCTCCTCAAGACGTGACAAATATAGTCTACGTTATTGGTACATTGGGTTATGAC TTTGGAACTGAAGCACGGCGGGACTCATTTAAACAGTTGATGCCAGCAGTTACTATTGGAAATACCCAAATTCCAGCTAA CCCTTATGATGCTCGTCAAATGGTGGATTATTTGGCGAATAATCTTTCGGAAGCTAAATCTTTGATTTGGACTTTGAATA TGGAATTGACTCCTATCTATGCTATTGAAGCTGTGGGGTCATTTGCACGGGAAGTTTATGAAGCTTTGCAAGAGTTACTT GCAGGGGAAGTAGAAGCGGAAGATGCTGAGAGATATATTGAGCGGGTGAGTATTCCGGGAAAATTAACTGGGCGTACAGT TAAGTTGTTCTCAGGCCAAGTGGTGCCTGTGATTGAACCTGTTAGTCCTCGTGGTATTTATGGCTGGCGGGTGAATACAT TGGTTGGTTCTGCTTTGGAAGCAGTTCGTGGAGAACAAGCAGAGGCTGACGATGAGCAAATGCGTCGGAGTTTGAGCAGT TTCCTAAATCGAGTTTATTACGATCTACGCAATTTAGGGCAGACTTCTCAAGACCGAGCTTTAAATTTTGCAGCTACTAA TGCTTTCCAAGCGGCTCAAACTTTCTCTACAGCAGTGGCAGCAGGCATGGAGTTGGATAGTATTGCTGTGACCAAGAGTC CATTCTGTCGGATGGATAGTGATTGTTGGGACGTGCAGTTGAAGTTTTTCGATCCAGAAAATAACCGTCGGGCGAAGAAG GTGTTCCGGTTTACCATTGATGTTAGCGATTTCATTCCGGTAACTTTGGGCGAAGTTCGTTCTTGGTCTTCTCCTTATTA G
Upstream 100 bases:
>100_bases TTACTATGGTAAGTTATATACGATTTATAAAAAAACAGGAGTTAAACATTGGTAACTAATGACTAATAACTGATAACTAA TAATTAATAACTGATAAAAG
Downstream 100 bases:
>100_bases AGGAGCGGCTAGGTGTAGGTTGGGTTGAGGAAAGGAAACTCAACCAGCCATCAGCAGCTGAGTTAAACTGATTTAATAGG ATATAGTTTAAGACATAGTT
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MPEISSIPGIKQLWAKTKGNSEVCVAVLDGLVDLKHPCFEGANLTQLPSLVQGQATPQSEMSLHGTHVASIIFGQPNSSV SGIAPHCRGLIVPIFSDYHRRTSQLNLARAIEQAVNAGANIINISGGELTDYGEAEDWLNRAVSLCQNNNVLLVAAAGND GCECLHVPAALPTVLAAGAMGENGQPLDYSNWGENYQTQGILALGENILGAEPGGGTRQLSGTSFATPVVSGVAALLMSL QLQREEKPDSQKVRTALLKTAVPCHAQEKRRCLVGQMNISGAIAHITGETMSESEQDNSNGIEASCGCESTPEASLPGSV GLENSLPTPADNGVVAAGVVEAGVTASQPLSSTNTSNTSNNQISAMPNNSQSNNSNGITPSQPPQDVTNIVYVIGTLGYD FGTEARRDSFKQLMPAVTIGNTQIPANPYDARQMVDYLANNLSEAKSLIWTLNMELTPIYAIEAVGSFAREVYEALQELL AGEVEAEDAERYIERVSIPGKLTGRTVKLFSGQVVPVIEPVSPRGIYGWRVNTLVGSALEAVRGEQAEADDEQMRRSLSS FLNRVYYDLRNLGQTSQDRALNFAATNAFQAAQTFSTAVAAGMELDSIAVTKSPFCRMDSDCWDVQLKFFDPENNRRAKK VFRFTIDVSDFIPVTLGEVRSWSSPY
Sequences:
>Translated_666_residues MPEISSIPGIKQLWAKTKGNSEVCVAVLDGLVDLKHPCFEGANLTQLPSLVQGQATPQSEMSLHGTHVASIIFGQPNSSV SGIAPHCRGLIVPIFSDYHRRTSQLNLARAIEQAVNAGANIINISGGELTDYGEAEDWLNRAVSLCQNNNVLLVAAAGND GCECLHVPAALPTVLAAGAMGENGQPLDYSNWGENYQTQGILALGENILGAEPGGGTRQLSGTSFATPVVSGVAALLMSL QLQREEKPDSQKVRTALLKTAVPCHAQEKRRCLVGQMNISGAIAHITGETMSESEQDNSNGIEASCGCESTPEASLPGSV GLENSLPTPADNGVVAAGVVEAGVTASQPLSSTNTSNTSNNQISAMPNNSQSNNSNGITPSQPPQDVTNIVYVIGTLGYD FGTEARRDSFKQLMPAVTIGNTQIPANPYDARQMVDYLANNLSEAKSLIWTLNMELTPIYAIEAVGSFAREVYEALQELL AGEVEAEDAERYIERVSIPGKLTGRTVKLFSGQVVPVIEPVSPRGIYGWRVNTLVGSALEAVRGEQAEADDEQMRRSLSS FLNRVYYDLRNLGQTSQDRALNFAATNAFQAAQTFSTAVAAGMELDSIAVTKSPFCRMDSDCWDVQLKFFDPENNRRAKK VFRFTIDVSDFIPVTLGEVRSWSSPY >Mature_665_residues PEISSIPGIKQLWAKTKGNSEVCVAVLDGLVDLKHPCFEGANLTQLPSLVQGQATPQSEMSLHGTHVASIIFGQPNSSVS GIAPHCRGLIVPIFSDYHRRTSQLNLARAIEQAVNAGANIINISGGELTDYGEAEDWLNRAVSLCQNNNVLLVAAAGNDG CECLHVPAALPTVLAAGAMGENGQPLDYSNWGENYQTQGILALGENILGAEPGGGTRQLSGTSFATPVVSGVAALLMSLQ LQREEKPDSQKVRTALLKTAVPCHAQEKRRCLVGQMNISGAIAHITGETMSESEQDNSNGIEASCGCESTPEASLPGSVG LENSLPTPADNGVVAAGVVEAGVTASQPLSSTNTSNTSNNQISAMPNNSQSNNSNGITPSQPPQDVTNIVYVIGTLGYDF GTEARRDSFKQLMPAVTIGNTQIPANPYDARQMVDYLANNLSEAKSLIWTLNMELTPIYAIEAVGSFAREVYEALQELLA GEVEAEDAERYIERVSIPGKLTGRTVKLFSGQVVPVIEPVSPRGIYGWRVNTLVGSALEAVRGEQAEADDEQMRRSLSSF LNRVYYDLRNLGQTSQDRALNFAATNAFQAAQTFSTAVAAGMELDSIAVTKSPFCRMDSDCWDVQLKFFDPENNRRAKKV FRFTIDVSDFIPVTLGEVRSWSSPY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4506775, Length=266, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550681, Length=266, Percent_Identity=28.1954887218045, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 71277; Mature: 71145
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEISSIPGIKQLWAKTKGNSEVCVAVLDGLVDLKHPCFEGANLTQLPSLVQGQATPQSE CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHH MSLHGTHVASIIFGQPNSSVSGIAPHCRGLIVPIFSDYHRRTSQLNLARAIEQAVNAGAN HHCCCCEEEEEEECCCCCCCCCCCHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC IINISGGELTDYGEAEDWLNRAVSLCQNNNVLLVAAAGNDGCECLHVPAALPTVLAAGAM EEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCHHHHHHHHHCCC GENGQPLDYSNWGENYQTQGILALGENILGAEPGGGTRQLSGTSFATPVVSGVAALLMSL CCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH QLQREEKPDSQKVRTALLKTAVPCHAQEKRRCLVGQMNISGAIAHITGETMSESEQDNSN HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCEEEEECCCCCEEEEECCCHHHCCCCCCCC GIEASCGCESTPEASLPGSVGLENSLPTPADNGVVAAGVVEAGVTASQPLSSTNTSNTSN CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCC NQISAMPNNSQSNNSNGITPSQPPQDVTNIVYVIGTLGYDFGTEARRDSFKQLMPAVTIG CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEC NTQIPANPYDARQMVDYLANNLSEAKSLIWTLNMELTPIYAIEAVGSFAREVYEALQELL CCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH AGEVEAEDAERYIERVSIPGKLTGRTVKLFSGQVVPVIEPVSPRGIYGWRVNTLVGSALE CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCEECEEHHHHHHHHHH AVRGEQAEADDEQMRRSLSSFLNRVYYDLRNLGQTSQDRALNFAATNAFQAAQTFSTAVA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHH AGMELDSIAVTKSPFCRMDSDCWDVQLKFFDPENNRRAKKVFRFTIDVSDFIPVTLGEVR HCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEHHHCCCCCHHHHC SWSSPY CCCCCC >Mature Secondary Structure PEISSIPGIKQLWAKTKGNSEVCVAVLDGLVDLKHPCFEGANLTQLPSLVQGQATPQSE CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHH MSLHGTHVASIIFGQPNSSVSGIAPHCRGLIVPIFSDYHRRTSQLNLARAIEQAVNAGAN HHCCCCEEEEEEECCCCCCCCCCCHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC IINISGGELTDYGEAEDWLNRAVSLCQNNNVLLVAAAGNDGCECLHVPAALPTVLAAGAM EEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCHHHHHHHHHCCC GENGQPLDYSNWGENYQTQGILALGENILGAEPGGGTRQLSGTSFATPVVSGVAALLMSL CCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHH QLQREEKPDSQKVRTALLKTAVPCHAQEKRRCLVGQMNISGAIAHITGETMSESEQDNSN HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCEEEEECCCCCEEEEECCCHHHCCCCCCCC GIEASCGCESTPEASLPGSVGLENSLPTPADNGVVAAGVVEAGVTASQPLSSTNTSNTSN CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCC NQISAMPNNSQSNNSNGITPSQPPQDVTNIVYVIGTLGYDFGTEARRDSFKQLMPAVTIG CEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEC NTQIPANPYDARQMVDYLANNLSEAKSLIWTLNMELTPIYAIEAVGSFAREVYEALQELL CCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH AGEVEAEDAERYIERVSIPGKLTGRTVKLFSGQVVPVIEPVSPRGIYGWRVNTLVGSALE CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCEECEEHHHHHHHHHH AVRGEQAEADDEQMRRSLSSFLNRVYYDLRNLGQTSQDRALNFAATNAFQAAQTFSTAVA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHH AGMELDSIAVTKSPFCRMDSDCWDVQLKFFDPENNRRAKKVFRFTIDVSDFIPVTLGEVR HCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEEHHHCCCCCHHHHC SWSSPY CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]