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The map label for this gene is gvpJ [H]

Identifier: 113475968

GI number: 113475968

Start: 3609064

End: 3609378

Strand: Direct

Name: gvpJ [H]

Synonym: Tery_2335

Alternate gene names: 113475968

Gene position: 3609064-3609378 (Clockwise)

Preceding gene: 113475967

Following gene: 113475971

Centisome position: 46.57

GC content: 39.05

Gene sequence:

>315_bases
ATGAAGACAAGTGCTAATATAGCTAAATCAGCTGGTGGAGATAGTCTAGCAGATGTGCTCGAAAGAGTCTTGGATAAAGG
AATCGTAATTGCTGGAGATATTTCTGTTTCCATTGCTAGTACAGAACTTCTGAATATTAAAATCCGCCTGTTAATATCCT
CTGTCGAGAGAGCCAAAGAAATTGGAATTAACTGGTGGGAAAGCGATCCCTCTTTGAGTAGTCAAAACAATTCTTTGGTG
CAGGTCAATCAAAAACTTCTTGAGCGAGTTGCTTCTCTTGAGTCAGAGATAGAAGCGCTTAAATACTCACAATAA

Upstream 100 bases:

>100_bases
GGCAGGAAGCCCTGAAGCAACTAGATGAAGTTCTAGAGGAACTTTTCCCGGCTGATCAACTTTCAATTTCTGATATTGGG
CTCAAAAAAGAGGGTAGTTT

Downstream 100 bases:

>100_bases
AAGTAGAAAAAAAAATGAAAATTAATAAAGTCAAAAATAATCAACTCAAAAGAATAAAAACTAGGCAAAATATTCTTAAT
AGTACGGGTCTTCGTGGTTG

Product: gas vesicle synthesis protein GvpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKTSANIAKSAGGDSLADVLERVLDKGIVIAGDISVSIASTELLNIKIRLLISSVERAKEIGINWWESDPSLSSQNNSLV
QVNQKLLERVASLESEIEALKYSQ

Sequences:

>Translated_104_residues
MKTSANIAKSAGGDSLADVLERVLDKGIVIAGDISVSIASTELLNIKIRLLISSVERAKEIGINWWESDPSLSSQNNSLV
QVNQKLLERVASLESEIEALKYSQ
>Mature_104_residues
MKTSANIAKSAGGDSLADVLERVLDKGIVIAGDISVSIASTELLNIKIRLLISSVERAKEIGINWWESDPSLSSQNNSLV
QVNQKLLERVASLESEIEALKYSQ

Specific function: Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. This protein could be important for the shape determ

COG id: NA

COG function: NA

Gene ontology:

Cell location: Vacuole, gas vesicle (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gas vesicle protein type A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000638
- InterPro:   IPR018493 [H]

Pfam domain/function: PF00741 Gas_vesicle [H]

EC number: NA

Molecular weight: Translated: 11268; Mature: 11268

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00234 GAS_VESICLE_A_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSANIAKSAGGDSLADVLERVLDKGIVIAGDISVSIASTELLNIKIRLLISSVERAKE
CCCCCCHHHCCCCCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHH
IGINWWESDPSLSSQNNSLVQVNQKLLERVASLESEIEALKYSQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTSANIAKSAGGDSLADVLERVLDKGIVIAGDISVSIASTELLNIKIRLLISSVERAKE
CCCCCCHHHCCCCCHHHHHHHHHHHCCEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHH
IGINWWESDPSLSSQNNSLVQVNQKLLERVASLESEIEALKYSQ
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9063646 [H]