| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is gvpN [H]
Identifier: 113475967
GI number: 113475967
Start: 3608132
End: 3609067
Strand: Direct
Name: gvpN [H]
Synonym: Tery_2334
Alternate gene names: 113475967
Gene position: 3608132-3609067 (Clockwise)
Preceding gene: 113475966
Following gene: 113475968
Centisome position: 46.56
GC content: 38.57
Gene sequence:
>936_bases TTGACTACTGTACTTAATGTCTCACCTGATAGATTTGTTAGCACCCCTAGTGTTGAACGTGTAACTCAACGCGCTTCTCG TTATTTAGAATCCGGTTACTCAGTTCACTTGCGCGGTCCCGCAGGAGTCGGTAAAACAACTCTCGCATTACACTTGGCTC ATTTACGTCAGCAACCTATTTTTTTAATGATTGGGGATGATGAGTTTAAAACCTCAGATTTAATCGGTAATAAGTCAGGA TATACAAGGAAAAAACTTGTAGATAATTACATCCACACTGTATTAAAAGTTGAAGATGAACTGAAGCATAATTGGATTGA TTCTAGGTTAACCTTAGCTTGTAAGGAAGGCTTCACTCTGATTTATGACGAATTTAACCGCTCTCGTCCAGAGGTAAACA ATGTTTTACTCTCTGTTTTAGAAGAAAAAATGTTGGTTTTACCACCTAGCCAAAATCAATCTGAATATATTCAGGTTCAT CCCCAGTTTAGAGTAATCTTAACTTCCAACTCTGAGGAATGGACAGGAGTTCATGCAACTCAAGATGCTTTATTAGACAG GGTGGTAACAATTGGCATGGGACAACCTGATATTTCGACTGAGCAGAATATCATCATACAGAAAACAGGAATAAACCCTC TGAAAGCTGAAGTCATAATTAAGCTGGTGCGCAGTGTTCGCGAAAGATTAGAGACAGAAGATTTAGGTAGTTTGCGTTCT GCTCTAATGATTTCTAAAGTTTGTCACGACCATGATATTCCTCTAGGTGGTAAAGATTCTAATTTTTCAGATCTTTGTGC TGATATATTAATATCACGAGCTAATTTGCCTCGGCAGGAAGCCCTGAAGCAACTAGATGAAGTTCTAGAGGAACTTTTCC CGGCTGATCAACTTTCAATTTCTGATATTGGGCTCAAAAAAGAGGGTAGTTTATGA
Upstream 100 bases:
>100_bases GAGTTTGAACTATAACTTGCCCCTACTATCGTTAGTAACATTTTAGGGCTATTACAGTACTACATCTAAAAATATTTATA CTTTAGGAGGAAATAATACT
Downstream 100 bases:
>100_bases AGACAAGTGCTAATATAGCTAAATCAGCTGGTGGAGATAGTCTAGCAGATGTGCTCGAAAGAGTCTTGGATAAAGGAATC GTAATTGCTGGAGATATTTC
Product: gas vesicle protein GvpN
Products: nitric oxide; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPIFLMIGDDEFKTSDLIGNKSG YTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTLIYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVH PQFRVILTSNSEEWTGVHATQDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSISDIGLKKEGSL
Sequences:
>Translated_311_residues MTTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPIFLMIGDDEFKTSDLIGNKSG YTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTLIYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVH PQFRVILTSNSEEWTGVHATQDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSISDIGLKKEGSL >Mature_310_residues TTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPIFLMIGDDEFKTSDLIGNKSGY TRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTLIYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVHP QFRVILTSNSEEWTGVHATQDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRSA LMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSISDIGLKKEGSL
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Vacuole, gas vesicle [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR013462 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: 1.7.99.7
Molecular weight: Translated: 34921; Mature: 34790
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPI CCEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCE FLMIGDDEFKTSDLIGNKSGYTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTL EEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCEE IYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVHPQFRVILTSNSEEWTGVHAT EEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCCHHH QDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH SDIGLKKEGSL HHCCCCCCCCC >Mature Secondary Structure TTVLNVSPDRFVSTPSVERVTQRASRYLESGYSVHLRGPAGVGKTTLALHLAHLRQQPI CEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCE FLMIGDDEFKTSDLIGNKSGYTRKKLVDNYIHTVLKVEDELKHNWIDSRLTLACKEGFTL EEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCEE IYDEFNRSRPEVNNVLLSVLEEKMLVLPPSQNQSEYIQVHPQFRVILTSNSEEWTGVHAT EEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCEEEECCEEEEEEECCCCCCCCCHHH QDALLDRVVTIGMGQPDISTEQNIIIQKTGINPLKAEVIIKLVRSVRERLETEDLGSLRS HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALMISKVCHDHDIPLGGKDSNFSDLCADILISRANLPRQEALKQLDEVLEELFPADQLSI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCH SDIGLKKEGSL HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nitrous oxide; acceptor; H2O
Specific reaction: nitrous oxide + acceptor + H2O = 2 nitric oxide + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9063646 [H]