| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475936
Identifier: 113475936
GI number: 113475936
Start: 3568160
End: 3568531
Strand: Direct
Name: 113475936
Synonym: Tery_2300
Alternate gene names: NA
Gene position: 3568160-3568531 (Clockwise)
Preceding gene: 113475933
Following gene: 113475940
Centisome position: 46.04
GC content: 33.6
Gene sequence:
>372_bases ATGAAATTATGGGAACATTTACTGCCAAAAGAAATACCAACTACAGAAGATATTAATCTAGAATTGTTAGCAAACGAATC TGAAAACCTCGCTGGAGGTGATATTTTAAATGTTGTAATTTCCGCAGCAAGTCGAGCAGTTATCAGAGAAGCAAAAGCTC AAAAAGTTTCCCTTTTTGACTTAGCTGAAGAAATAAAATTTGTGCGAGAAGCAAAGACAAAAATTGGTTCTCCTCACCAT CAAACTAACCCACAAAAAGCCAAAGTTAAAGAGACAATAATAAATCCAGATGATTTATCTCCAGAACTTCGCGATCGCTA CAATGAAAACATTTCAAAAATAGATAAATCTGAGTCAGATTTTAACAACTAA
Upstream 100 bases:
>100_bases GTCATAGCTATAAGGAGAAGGCATAATCTTTCCTAGATAATTTTTCGAGCATTATGTCCTAATCTTTGCTTCGACTGCTA TACCAGACAAAGAATGTCGC
Downstream 100 bases:
>100_bases ATAATATACATAAATTTTCATTTTAGCATACAAAAATAGGGAAGTTTCATAGAACATCCCTACAAAATTTTAGTTGTAAA AATATGATTAATTATTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFDLAEEIKFVREAKTKIGSPHH QTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESDFNN
Sequences:
>Translated_123_residues MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFDLAEEIKFVREAKTKIGSPHH QTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESDFNN >Mature_123_residues MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFDLAEEIKFVREAKTKIGSPHH QTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESDFNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13876; Mature: 13876
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFD CCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEEIKFVREAKTKIGSPHHQTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC FNN CCC >Mature Secondary Structure MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFD CCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAEEIKFVREAKTKIGSPHHQTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESD HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC FNN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA