Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475936

Identifier: 113475936

GI number: 113475936

Start: 3568160

End: 3568531

Strand: Direct

Name: 113475936

Synonym: Tery_2300

Alternate gene names: NA

Gene position: 3568160-3568531 (Clockwise)

Preceding gene: 113475933

Following gene: 113475940

Centisome position: 46.04

GC content: 33.6

Gene sequence:

>372_bases
ATGAAATTATGGGAACATTTACTGCCAAAAGAAATACCAACTACAGAAGATATTAATCTAGAATTGTTAGCAAACGAATC
TGAAAACCTCGCTGGAGGTGATATTTTAAATGTTGTAATTTCCGCAGCAAGTCGAGCAGTTATCAGAGAAGCAAAAGCTC
AAAAAGTTTCCCTTTTTGACTTAGCTGAAGAAATAAAATTTGTGCGAGAAGCAAAGACAAAAATTGGTTCTCCTCACCAT
CAAACTAACCCACAAAAAGCCAAAGTTAAAGAGACAATAATAAATCCAGATGATTTATCTCCAGAACTTCGCGATCGCTA
CAATGAAAACATTTCAAAAATAGATAAATCTGAGTCAGATTTTAACAACTAA

Upstream 100 bases:

>100_bases
GTCATAGCTATAAGGAGAAGGCATAATCTTTCCTAGATAATTTTTCGAGCATTATGTCCTAATCTTTGCTTCGACTGCTA
TACCAGACAAAGAATGTCGC

Downstream 100 bases:

>100_bases
ATAATATACATAAATTTTCATTTTAGCATACAAAAATAGGGAAGTTTCATAGAACATCCCTACAAAATTTTAGTTGTAAA
AATATGATTAATTATTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFDLAEEIKFVREAKTKIGSPHH
QTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESDFNN

Sequences:

>Translated_123_residues
MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFDLAEEIKFVREAKTKIGSPHH
QTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESDFNN
>Mature_123_residues
MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFDLAEEIKFVREAKTKIGSPHH
QTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESDFNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13876; Mature: 13876

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFD
CCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEEIKFVREAKTKIGSPHHQTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESD
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
FNN
CCC
>Mature Secondary Structure
MKLWEHLLPKEIPTTEDINLELLANESENLAGGDILNVVISAASRAVIREAKAQKVSLFD
CCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEEIKFVREAKTKIGSPHHQTNPQKAKVKETIINPDDLSPELRDRYNENISKIDKSESD
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
FNN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA